Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0353 ATGGAGGATATTGAAGAAGGGGTTAATGAAAGCGAAAGTAAGAGTTCTATCGAGGGTTTACCTCCAAATCCAACTGCTACTATTGTTTATCGTCAAATCACACGCACTGATCCTTTGGTTCTTCCATGTAAAAATTCCATGGTTCGCCACTCTTCTCTTGCCAGTGGTAAGATAAAGGCGAAGTTGTCTGATGTTTATGCTGAGCCAGGATGTATCATTGAAGATTGTCAGTCTGATTTCCTTCCAGAACTTCGTTCAGGGGCATATGCTGATATTGGGTTCAGATCAACTATGGAAGATGTATATATTTGCGCTGACAATTTTATGCAGAATAGTGCGCTCAAGAACCATATAGATGGGCCCAGTGCTTTCTATGCAGTATTTCTCTATTCTTTCCAATTAGCTTTGTTGAGTACTGACTATTGTGTGGATGAATTTGAGCTTTCTGTATTTGATGGACATGGTGGAAAACATGCTGCTGACTTTGCTTGTCATCATTTGCTGAAGTTTATTCTTGAGGATGAAACTTTCCCAAGTGATATTGAAAGGGTAGTTACTTCAGCATTTCTGCAAACAGACAATGCCTTCGCAGAAGCTTGCACTCTGGATGCTGCCCTTGCATCTGGCACCACTGCATTGGCTGTGGTTGTTATTGGAAGGTTGCTGGTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTTTGCCATCGCGGGAAAGCAATCGAAATGTCCAGAGATCATAAACCAGCTTGCAGCAAAGAAAAGAAGCGTATTGAGGCATCTGGAGGGTATGTCTGCGATGGATATCTTAACGGACAACTAAACGTTGCTCGCGCCCTTGGTGACTGGCACATGGAAGGAATGAAAGCCAGAGATGGTGGACCATTAAGTGCAGAACCTGAACTTATGTCTACGAAACTCACCGCCAAGGATGAATTTCTCATTATAGGTTGCGACGGAATATGGGATGTATTTCGGAGCCAAAATGCAGTGGACTTTGCTCGACGCAGGCTTCAGGAGCACAACAACCCCACCATGTGTAGTAAGGATCTAGTTGATGAGGCTCTTAAGAGAAAAAGTGGAGACAATTTATCTGTTATTGTGGTTTGCTTCCAGCAGCAGCCTCCACCTAACTTGGTGGCTCCACGCTCTAGAGTGAATAGGAGCTTTTCTGCTGAAGGGTTGAAGGAGTTGCAAAGCTTCTTGGATGGATTGGGCAATTGA 1224 0.4412 MEDIEEGVNESESKSSIEGLPPNPTATIVYRQITRTDPLVLPCKNSMVRHSSLASGKIKAKLSDVYAEPGCIIEDCQSDFLPELRSGAYADIGFRSTMEDVYICADNFMQNSALKNHIDGPSAFYAVFLYSFQLALLSTDYCVDEFELSVFDGHGGKHAADFACHHLLKFILEDETFPSDIERVVTSAFLQTDNAFAEACTLDAALASGTTALAVVVIGRLLVVANAGDCRAVLCHRGKAIEMSRDHKPACSKEKKRIEASGGYVCDGYLNGQLNVARALGDWHMEGMKARDGGPLSAEPELMSTKLTAKDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNNPTMCSKDLVDEALKRKSGDNLSVIVVCFQQQPPPNLVAPRSRVNRSFSAEGLKELQSFLDGLGN 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0353 407 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 76 128 - -
Lal21g0353 407 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 149 393 - -
Lal21g0353 407 PANTHER PROTEIN PHOSPHATASE 2C 76 128 IPR015655 GO:0004722|GO:0006470
Lal21g0353 407 PANTHER PROTEIN PHOSPHATASE 2C 149 393 IPR015655 GO:0004722|GO:0006470
Lal21g0353 407 Gene3D - 73 375 IPR036457 -
Lal21g0353 407 SMART PP2C_4 75 369 IPR001932 -
Lal21g0353 407 Pfam Protein phosphatase 2C 148 363 IPR001932 -
Lal21g0353 407 SUPERFAMILY PP2C-like 80 373 IPR036457 -
Lal21g0353 407 MobiDBLite consensus disorder prediction 1 23 - -
Lal21g0353 407 CDD PP2Cc 85 371 IPR001932 -
Lal21g0353 407 ProSiteProfiles PPM-type phosphatase domain profile. 85 371 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0353 Lal-Chr21 2407192 2410491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0353 7 407 PP2C-type Phosphatase Gene Family AT2G25620 62.560 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0353 K14803 - gmx:100815725 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0353 21 2407192 2410491 Lal21g0353 21 2407192 2410491 ECH
Lal17g0246 17 1529036 1532743 Lal21g0353 21 2407192 2410491 LSH