Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0347 ATGGCGAAGAAGAATCCCCTGGTTTTTATGGATGTGTCCATTGATGGGGATCCTTTTGAAAGGATTGTTTTTGAGCTTTTCTATGACGTTGCTCCCAAGACTGCAGAAAACTTTCGTGTACTATGTACAGGAGAAAAGGGAGTCAGTCCAAATACTGGAAAGCCACTGCACTACAAAGGGTCTTTCTTCCATCAAATTTTAAAAGGTTCCTTTGTGCAGTTGTCCAAGTTGCAAGCCTTGTTCCATTTGCATGTTTCCTATGACAATGGGACTGGTGGAGAAAGCATATATGGCTCGAATTTCCCAGATGAATCATATAGGCTAAAGCACGATGCTCCAGGCCTTCTATCCATGGCAATTGCTGACCGTGATACTCTTGGTTCTCATTTTATTATCACTTTGAAAGCTGACCATCATCTTGATAGGAAGCATGTGGTGTTTGGGAAGCTTGTGCTAGGGCATAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGGCGTCCAACTGTAACTGTTAAAATCGTTAATTGTGGTGAATATACTGAAGCACGGCTGAAAGGAAAACACAAAAAATCTTCAAAAGACAGAAGGAAAAGAAGAAGATACTACTCATCTGAGTCGGAGAGTTCTTCAGATTCAGACACAGAGTCTTCTGAAACTGATAGTGATTCTGAGTCAGATGTGTCCTCATCGTCTGACTTAAGTTCTTCTAGTGATGACAGGCGAAGGAAGAGAAAGAGATCTAGAAAAGATAAATATAGGCATGGAAAAAGAAGGGATAAACGCCATGATAAGAGACGGAAGAGGCGGGATAAGAGATCAAAGCGTAGATCGAGAAGGGAACCTGGCAGTGATTCAGATAGTGAGAGTAACAGGGACATTAACTCTGATGGTGAAAGTCTTGATGCTCAAGGAAAAGAGCAAAAGTCCAAAGATGATTCTCACAAAGATGTAGCTGAAGTTCGGTCTCCCTTAGTTGTGGAGAGAGACAATCATAACAAGGATGGGGTAGTGGATATGCTAGAGAATGCGAAACTTCCAAAGGAAAATGGAAATCAGATTACTAATGGCATTGGAGCTGACTATAGATCTGACCGAAGTGAAGAGAGGCAGCCTGATGTGATGGATGATCATTCGGGAAAATCTAGGAGCCGAAGCATGAGTCCTAAACGACCCATGAGTAAGAGTATGAGTATCAGTCCCCGGAGAAGTCCGAGCAAAACCCCTCCAAAAAAGAGATTTAGCAGAGGTCCAACTGGTAGTAGAAGCCCTCCTCCATCAAGGAGGAATGTGAGCAGAAGTCCGATTAGAAGCATTGACAGAAGTCTAAGCAAAAGCATAAGTAGAAGTCCAGTAAGGGGCAGGAAGGGAATAAGTGTGAGTAGAAGTCCAGCAAGGGTCGGGATGGGGAGAAGTATTAGTAGAAGCCCAGTAAGGGGTGGGAAGGGGAGAAGTGTCAGTAGAAGCCCTGTGAGGAGTAGGAAGAGTAGAAGTGTCAGTAGAAGCCCTGTGAGAAGTAGGAAGGGGAGAAGTGAGAGTAGAAGCCCTGTGAGGAACAGGAAGGGAAGAAGTGTGAGTAGAAGCCCTGTGAGGAGTAGGAAAGGGAGAAGTGTCAGTAGAAGTCCTGTGAGAACTCACTCTCATAGAAGTGTCAGCAAGAGCCCTGTAAGAAGTAGGAGACCTCTGAGGATTAGGAAGGGGAGAAGTGTGAGTAGAAGCCCTGTGAGAACTCACTCTCTTAGTGTCAGCAGGAGCCCTGTACGATCCCTCTCTCGAGTTCGCAGGAGTCCTCCCAGAGCATCACCACGAAAAACAATCAGCAGGAGTCCTCCCAGAGTATCAAGAAAGAGTGTGAGTAGGAGTCCAGTTAGATCACCTGCAAGAAGCTTAAGCAAAAGCTCTGGCAGGGTCCCTTCGAGGAGAGACATTAGTCGCAGTCCTGTCAGAGCACCAAGCCGAAGCAATCGCCGCAGTTACTCTAGGAGTCTTAGTCCTGTTCGCAGGACAAGGACACCTCGCCGGACGAGTGTGTCGAGGAGTATTTCACCTGCTGCTTCGCCAAAGCGTGTCAGAAGGGGAAGAGGTTTTAGTGAACGATACTCTTATGCACGGAGGTATAATACCCCCTCACGGTCTCCTGTGAGGTCATACCACTACAATGGAAGAGATCGCGAGAGATATTCTAGTTACAGAAGATATTCCCCTAGGCGTTACAGGAGCCCGCCACCACATGGAAGAACTCCACCAAGGTTCCGAAGCAGGAGGACACCATCTGTTTCCCCCAGCCCACGTTATCGTGCTCGACGATATAGCCGAAGCCGTAGCCTGGTCCGCAGTCGTTCCCCAGTTGAGCCACATCGATCTCACTCTTCTCGTGTGGAGAGGCGATTGTCTCGGAGCAGGAGTGCATCCAAGTCCAGGTCTTCCGAATCACGATCTCCACGGAAAGCAATCAGAGACAACAGGTCAGGGTCATCGTCCAGAAGTCCAGATGGAAAGAAAGGTTTGGTCTCTTATGGAGATGGTTCTCCCTACTCGGGCGAAAGGTGA 2556 0.4691 MAKKNPLVFMDVSIDGDPFERIVFELFYDVAPKTAENFRVLCTGEKGVSPNTGKPLHYKGSFFHQILKGSFVQLSKLQALFHLHVSYDNGTGGESIYGSNFPDESYRLKHDAPGLLSMAIADRDTLGSHFIITLKADHHLDRKHVVFGKLVLGHNILKKIEDVGDEEGRPTVTVKIVNCGEYTEARLKGKHKKSSKDRRKRRRYYSSESESSSDSDTESSETDSDSESDVSSSSDLSSSSDDRRRKRKRSRKDKYRHGKRRDKRHDKRRKRRDKRSKRRSRREPGSDSDSESNRDINSDGESLDAQGKEQKSKDDSHKDVAEVRSPLVVERDNHNKDGVVDMLENAKLPKENGNQITNGIGADYRSDRSEERQPDVMDDHSGKSRSRSMSPKRPMSKSMSISPRRSPSKTPPKKRFSRGPTGSRSPPPSRRNVSRSPIRSIDRSLSKSISRSPVRGRKGISVSRSPARVGMGRSISRSPVRGGKGRSVSRSPVRSRKSRSVSRSPVRSRKGRSESRSPVRNRKGRSVSRSPVRSRKGRSVSRSPVRTHSHRSVSKSPVRSRRPLRIRKGRSVSRSPVRTHSLSVSRSPVRSLSRVRRSPPRASPRKTISRSPPRVSRKSVSRSPVRSPARSLSKSSGRVPSRRDISRSPVRAPSRSNRRSYSRSLSPVRRTRTPRRTSVSRSISPAASPKRVRRGRGFSERYSYARRYNTPSRSPVRSYHYNGRDRERYSSYRRYSPRRYRSPPPHGRTPPRFRSRRTPSVSPSPRYRARRYSRSRSLVRSRSPVEPHRSHSSRVERRLSRSRSASKSRSSESRSPRKAIRDNRSGSSSRSPDGKKGLVSYGDGSPYSGER 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0347 851 MobiDBLite consensus disorder prediction 650 685 - -
Lal21g0347 851 MobiDBLite consensus disorder prediction 507 521 - -
Lal21g0347 851 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 10 180 IPR002130 GO:0000413|GO:0003755
Lal21g0347 851 MobiDBLite consensus disorder prediction 244 279 - -
Lal21g0347 851 MobiDBLite consensus disorder prediction 490 506 - -
Lal21g0347 851 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 9 181 IPR002130 GO:0000413|GO:0003755
Lal21g0347 851 MobiDBLite consensus disorder prediction 422 451 - -
Lal21g0347 851 MobiDBLite consensus disorder prediction 364 386 - -
Lal21g0347 851 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 3 185 - -
Lal21g0347 851 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 184 310 - -
Lal21g0347 851 MobiDBLite consensus disorder prediction 280 344 - -
Lal21g0347 851 MobiDBLite consensus disorder prediction 186 851 - -
Lal21g0347 851 MobiDBLite consensus disorder prediction 575 592 - -
Lal21g0347 851 MobiDBLite consensus disorder prediction 719 734 - -
Lal21g0347 851 Gene3D - 1 182 IPR029000 -
Lal21g0347 851 MobiDBLite consensus disorder prediction 522 574 - -
Lal21g0347 851 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 26 41 IPR002130 GO:0000413|GO:0003755
Lal21g0347 851 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 63 75 IPR002130 GO:0000413|GO:0003755
Lal21g0347 851 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 129 IPR002130 GO:0000413|GO:0003755
Lal21g0347 851 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 129 141 IPR002130 GO:0000413|GO:0003755
Lal21g0347 851 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 157 IPR002130 GO:0000413|GO:0003755
Lal21g0347 851 MobiDBLite consensus disorder prediction 388 407 - -
Lal21g0347 851 MobiDBLite consensus disorder prediction 781 824 - -
Lal21g0347 851 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 184 310 - -
Lal21g0347 851 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 185 - -
Lal21g0347 851 SUPERFAMILY Cyclophilin-like 3 182 IPR029000 -
Lal21g0347 851 MobiDBLite consensus disorder prediction 609 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0347 Lal-Chr21 2360673 2367391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0347 25 177 U-box Gene Family AT5G67530 36.129 1.45e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0347 K09566 - gmx:100785820 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0347 21 2360673 2367391 Lal21g0347 21 2360673 2367391 ECH