Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0334 ATGAGTTCAAGTCTGAGTAACCATCTTCTCTTGAGTTTACAACGGCCATCTGTGTCAACTATCAATCCCAACGACCATGCTGCTGCATGTTCAGATATAGGTTCAATTGCAGTTGTACCAAGTAGCAAAAGGAGAGAGCTTATATGTTGCTTAGCCACGTTCCCATGTCTTCTTCCCCTAACTCCTATCATGTCTTATCTCCCAGCCAATGCTATGCCGTTAGATACAAAGGAGTATGTTCTCATCAAACAAGAGGTGAGGAAGGTTTTGTCAAAGGCAAAAGCTGCAGGTGTACTTCGTTTGGTTTTTCATGATGCAGGAACTTTCCAATTAGATGACAACACAGGTGGTATGAATGGTTCTATAATCTATGAACTTGAAAGACCTGAAAATGCTGGCTTGAAAAAATCAGTTCTGCAAAAGGCGAAGACTGAGATAGAAGCCATCCAACCAGTATCGTGGGCGGACATGATTGCTGTGGCCGGAGCCGAAGCAGTCGAACTATGTGGAGGTCCACCAATCCAAGTTTTATTGGGCAGGCTAGATTCATTAGGGGCTGATCCTGAAGGGAAACTTCCTGAGGAATCGCTCGGTGCTTCTGGTTTGAAGAAATGCTTCCAGCGAATGGGCTTTTCAACACAAGAACTCGTAGCTTTGTCCGGAGCTCACACCCTTGGAAGTAAAGGTTTTGGGAGCCCAACTTCCTTTGACAATTCATATTATAAGGTTCTTTTGGAGAAGCCTTGGACATCTGCAGGTGGTAGTATGATTGGCCTTCCTTCAGATCATGCACTTGTTGAGGATGATGAATGCATTAGATGGATTAATAAATACGCGGACAATGAGAACATGTTCTTTGAAGATTTCAAGAATGCTTATCTCAAGCTGGTGAACTCTGGTGTGAGATGGAATGGCTTATAA 921 0.4354 MSSSLSNHLLLSLQRPSVSTINPNDHAAACSDIGSIAVVPSSKRRELICCLATFPCLLPLTPIMSYLPANAMPLDTKEYVLIKQEVRKVLSKAKAAGVLRLVFHDAGTFQLDDNTGGMNGSIIYELERPENAGLKKSVLQKAKTEIEAIQPVSWADMIAVAGAEAVELCGGPPIQVLLGRLDSLGADPEGKLPEESLGASGLKKCFQRMGFSTQELVALSGAHTLGSKGFGSPTSFDNSYYKVLLEKPWTSAGGSMIGLPSDHALVEDDECIRWINKYADNENMFFEDFKNAYLKLVNSGVRWNGL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0334 306 Pfam Peroxidase 83 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal21g0334 306 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 41 302 IPR044831 GO:0004601|GO:0034599
Lal21g0334 306 ProSitePatterns Peroxidases active site signature. 95 106 IPR019794 GO:0004601
Lal21g0334 306 ProSitePatterns Peroxidases proximal heme-ligand signature. 215 225 IPR019793 -
Lal21g0334 306 Gene3D Peroxidase, domain 2 193 293 - -
Lal21g0334 306 PRINTS Plant ascorbate peroxidase signature 95 110 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lal21g0334 306 PRINTS Plant ascorbate peroxidase signature 113 123 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lal21g0334 306 PRINTS Plant ascorbate peroxidase signature 151 169 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lal21g0334 306 PRINTS Plant ascorbate peroxidase signature 170 182 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lal21g0334 306 PRINTS Plant ascorbate peroxidase signature 191 208 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lal21g0334 306 PRINTS Plant ascorbate peroxidase signature 209 230 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lal21g0334 306 PRINTS Plant ascorbate peroxidase signature 277 301 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lal21g0334 306 Gene3D - 83 300 - -
Lal21g0334 306 ProSiteProfiles Plant heme peroxidase family profile. 95 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal21g0334 306 SUPERFAMILY Heme-dependent peroxidases 93 304 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal21g0334 306 PRINTS Haem peroxidase superfamily signature 95 109 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal21g0334 306 PRINTS Haem peroxidase superfamily signature 152 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal21g0334 306 PRINTS Haem peroxidase superfamily signature 170 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal21g0334 306 PRINTS Haem peroxidase superfamily signature 215 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal21g0334 306 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 41 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0334 Lal-Chr21 2226920 2234731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0334 95 304 Peroxidase AT4G16270 31.522 1.95e-22 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0334 K00434 - gmx:100792735 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0334 21 2226920 2234731 Lal21g0334 21 2226920 2234731 ECH