Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0330 ATGTTTGCTTCAGAAAATGGATTGAAGGGAGACCCAAGGCTTGAAGCAATTTCTCAAGCAATCAGAGTTGTTCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATTACGACATTGTTGTTGGATCATAAGGCGTTCAAACACACGGTCGACATATTTGTCGATCGTTACAGAGACATGAACATTAACGTTGTTGCCGGAATTGAAGCGAGGGGCTTCATGTTTGGTCCACCAATTGCATTGGGCATTGGTGCTAAGTTTGTTCCTTTACGCAAACCTCGCAAGCTGCCAGGTGAAGTAATTTCAGAAAAGTATGTTCTAGAATATGGAACCGATTGTTTGGAGCTTCACGTTGGCGCTGTTCAGCCCGGTGAACGCGTCATAGTTATTGATGATTTGGTAGCTACAGGTGGAACACTGAAAGCAGCTATCAGACTTCTAGAACGTGTTGAAGCTGAAGTAGTGGAATGTGCTTGTGTGATCGGTGTACCTGATGTTAAGGGACAGTGCAGGTTTATCGGGAAGCCACTTTATGTCCTTGTGGAGCCCCGCGAAGTAGATGAATGTTTTTAA 576 0.441 MFASENGLKGDPRLEAISQAIRVVPHFPKQGIMFQDITTLLLDHKAFKHTVDIFVDRYRDMNINVVAGIEARGFMFGPPIALGIGAKFVPLRKPRKLPGEVISEKYVLEYGTDCLELHVGAVQPGERVIVIDDLVATGGTLKAAIRLLERVEAEVVECACVIGVPDVKGQCRFIGKPLYVLVEPREVDECF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0330 191 Pfam Phosphoribosyl transferase domain 52 166 IPR000836 -
Lal21g0330 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 188 - -
Lal21g0330 191 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lal21g0330 191 CDD PRTases_typeI 51 183 IPR000836 -
Lal21g0330 191 Gene3D - 5 183 IPR029057 -
Lal21g0330 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 1 188 - -
Lal21g0330 191 SUPERFAMILY PRTase-like 20 175 IPR029057 -
Lal21g0330 191 TIGRFAM apt: adenine phosphoribosyltransferase 18 178 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0330 Lal-Chr21 2201146 2209951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0330 11 183 PRT Gene Family AT1G27450 69.364 1.09e-87 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0330 K00759 - gmx:100499904 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0330 21 2201146 2209951 Lal21g0330 21 2201146 2209951 ECH
Lal17g0225 17 1401658 1404394 Lal21g0330 21 2201146 2209951 LSH