Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0317 ATGAAAATGAAACTTCCTCTTATACTTGTAATTCTTCACCAACTTATCCAGCTTCACGTGGCTGAATACCCTCCTCCTGTTTCTTCACCTCAACCTGCACGCATTGGGGTGGAAGGCACACACAAACATTCACACAAGAAATTGGTGATAGCTTTAGTTGTAGTTAGCACTGCACTTGCTGCACTTGTTTTGAGTTTGTTATGCTTTTGGATTTATCAACATACCAAGTACCCTTCAAAATCCAATACGAAGAAAAATGTCCAAAGCTCAGAGAAAGGGGTGGCTGTAGCACCATCTTTGAGTAAATTCAGTTCTGTGAAGTTGGTTGGAATGAAAGGTTCTGTTCCAATAATTGATTATAAGCAAATAGCAAAAGACACCAATAATTTCAAGGAAAGTAACATCTTGGGTGAGGGTGGTTTTGGATGTGTTTACAAGGCTTGTTTGGATGATAACTTGGATGTAGCTGTCAAGAAACTACACTGTGAAACTCAAATTGCTGAGAGAGAATTTGAGATGATTTTGCAGAATGAGGTGGATTTGTTAAGTAAAATTCAGCATCCAAATATAATTACTTTGCTGGGTTGTAGTGTTGATGGGAACACAAGGTTTATTGTGTATGAGTTGATGCAAAATGGATCATTGGAAGCTCAGTTACATGGACCTTCTCATGGTTCAGCATTGACTTGGCACATGAGGATGAAGATTGCTCTTGACACAGCAAGGGGATTAGAATATCTGCATGAGCATTGTTACCCTCCAGTGATACACAGAGATATGAAATCTTCTAATATTCTTTTAGATGCAAAATTTAATGCCAAGCTTTCTGATTTTGGTCTTGCCATAATTGATGGGTCCCAAAGCAAGAAGAGCATCAAGCTTTCAGGCACCTTGGGGTATGTAGCCCCAGAGTATCTTTTAGATGGTGAATTGAGTGATAAAAGTGATGTATATGCTTTTGGGGTGGTGCTACTTGAGCTCTTATTAGGAAGAAAGCCTGTGGAAAAAGTGGCACCAGCTCAATGCCAATCTATTGTGACATGGGCCATACCTCAGCTCACAGATAGATCCAAGCTTCCAAACATTGTGGATCCTGTGATTAGGAATACAATGGATCCCAAGCACTTATACCAGGTTGCTGCTGTAGCTGTGCTGTGTGTGCAACCTGAACCAAGTTACAGGCCTTTGATCACAGATGTTCTCCACTCACTTGTCCCTCTGGTTACCACTGAGCTTGGAGGAACACTCAGAGTTTCACAAGTGCCAAAACATGTGAATTCCAGTCATTGA 1290 0.4078 MKMKLPLILVILHQLIQLHVAEYPPPVSSPQPARIGVEGTHKHSHKKLVIALVVVSTALAALVLSLLCFWIYQHTKYPSKSNTKKNVQSSEKGVAVAPSLSKFSSVKLVGMKGSVPIIDYKQIAKDTNNFKESNILGEGGFGCVYKACLDDNLDVAVKKLHCETQIAEREFEMILQNEVDLLSKIQHPNIITLLGCSVDGNTRFIVYELMQNGSLEAQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCYPPVIHRDMKSSNILLDAKFNAKLSDFGLAIIDGSQSKKSIKLSGTLGYVAPEYLLDGELSDKSDVYAFGVVLLELLLGRKPVEKVAPAQCQSIVTWAIPQLTDRSKLPNIVDPVIRNTMDPKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLVPLVTTELGGTLRVSQVPKHVNSSH 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0317 429 Pfam Protein kinase domain 131 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0317 429 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
Lal21g0317 429 ProSiteProfiles Protein kinase domain profile. 130 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0317 429 PANTHER OS01G0750732 PROTEIN 39 423 - -
Lal21g0317 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Lal21g0317 429 SUPERFAMILY Protein kinase-like (PK-like) 109 404 IPR011009 -
Lal21g0317 429 Gene3D Transferase(Phosphotransferase) domain 1 210 413 - -
Lal21g0317 429 PANTHER BNAA04G14780D PROTEIN 39 423 - -
Lal21g0317 429 SMART serkin_6 130 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0317 429 Gene3D Phosphorylase Kinase; domain 1 90 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0317 Lal-Chr21 2119601 2125415 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0317 38 408 Receptor kinase-like Gene Family AT3G58690 43.236 4.22e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Lal21g0317 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0317 - - gmx:100784795 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0317 21 2119601 2125415 Lal21g0317 21 2119601 2125415 ECH
Lal8g1570 8 20024752 20028974 Lal21g0317 21 2119601 2125415 PCT
Lal21g0317 21 2119601 2125415 Lal8g1570 8 20024752 20028974 PCT