Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0310 ATGGCAAAATGTCACCGTAACGATGTTGGATCTATCGCTCTCGATCACCGCCGCGCTACCAAAAACTCAACCTCCGTCAGCCACTTCCGCCTCTGGAATTCCACACTCCGACGCATCATCTTCGACGCCGTCAGCTGCGGAAGCACCTCTCGCTACAAGTATGACAACGACGGCGAGATAACCTCCACCGCCTCAACGAGCCGCAGGGAGAAACATGCGGAAGATCAGAAAACGGAGAAGAAGGTTATGAACGTAGCGGAGAATGAAACGGAAGAAGCATCGAGGAAGAAGAAGGAAGAGGAATTGAGAGAGATGAAGGAAATGGTGAAGGAGTTGGAGGGAGAGGATTTGATGAAGAAGAGAGTGGCAGCGAAGAGAGTGAGGAAGTTGGCGAAGGAAGAAGAGTTGGAAGTGAGAGGAACACTTGCAATGTTGGGAGTGATTCCTCTACTGGTTGGAATGGTTGATGATCAAAATTCAGTTGAATCTCAGATTGAGTCTCTCTATGCATTACTCAATCTCGGAATCGGAAATGATGCAAATAAAGCGGCCATTGTCAAAGTTGGTGCAGTTCACAAAATGCTCAAGCTTATTGATTCCCCAGATTCATCAGTGTGTGAAGCAATAGTTGCAAATTTCCTTGGATTGACTGCTTTGGATTCTAACAAACCAATAATTGGGTCCTCGGGCGCAATACCGTTCTTAGTTAGAACCCTTCAAAATTTAGATAATAGAAGTAGGCCCCAAGCTAAGCAAGATGCTCTCCGAGCTCTGTACAATCTTTCAATCACTCCAACAAACATTTCATATGTTTTGGAAACTGATTTGGTTTCATTTCTCATAAACTCAATAGGAGACATGGAAATAAGTGAAAGAGTTCTCTCTATCCTAAGCAATTTGGTGTCAACACCAGAGGGTAGAAAAGCTATCAGTTCTGTAAGGGATGCAATCCCAATTCTGATGGATGTATTGAATTGGGCAGATTCCCCAAAGTGCCAAGAGAAAGCATCATACATTTTGATGATTATGGCACATAAATCTTATGGCGACAGGCACGCTATGATTGAGGCAGGGATTGCATCAACACTTCTTGAGTTGACACTTTTGGGCACCCCATTGGCACAGAAAAGAGCCTCAAGGATATTGGAATGTTTGAGGATAGATAAAGGGAAGCAAGTTTCTAGGAGTTATGGTGGAAACTTGGGTGCAACTGTGTCTGCGCCAATCTGTGGCTCTTCATCATCTTTTACAAAGACGGAGGGACGAAGCGTTGAGGACGAAGATATGATGAGTGAGGAGAAGAAAGCTGTGAAGCAATTAGTCCAGCAAAGTTTGCAGAACAACATGAGGAAAATTGTGAAGAGGGCCAATTTGCGTCAAGATTTCATTCCATCGGAGCGTCTTACTTCACTCACTTTGAGTTTGACTTCAAAGAGCCTGCCTCTTTGA 1449 0.4438 MAKCHRNDVGSIALDHRRATKNSTSVSHFRLWNSTLRRIIFDAVSCGSTSRYKYDNDGEITSTASTSRREKHAEDQKTEKKVMNVAENETEEASRKKKEEELREMKEMVKELEGEDLMKKRVAAKRVRKLAKEEELEVRGTLAMLGVIPLLVGMVDDQNSVESQIESLYALLNLGIGNDANKAAIVKVGAVHKMLKLIDSPDSSVCEAIVANFLGLTALDSNKPIIGSSGAIPFLVRTLQNLDNRSRPQAKQDALRALYNLSITPTNISYVLETDLVSFLINSIGDMEISERVLSILSNLVSTPEGRKAISSVRDAIPILMDVLNWADSPKCQEKASYILMIMAHKSYGDRHAMIEAGIASTLLELTLLGTPLAQKRASRILECLRIDKGKQVSRSYGGNLGATVSAPICGSSSSFTKTEGRSVEDEDMMSEEKKAVKQLVQQSLQNNMRKIVKRANLRQDFIPSERLTSLTLSLTSKSLPL 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0310 482 MobiDBLite consensus disorder prediction 55 95 - -
Lal21g0310 482 Gene3D - 248 387 IPR011989 -
Lal21g0310 482 MobiDBLite consensus disorder prediction 64 95 - -
Lal21g0310 482 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 482 - -
Lal21g0310 482 SMART arm_5 219 263 IPR000225 GO:0005515
Lal21g0310 482 SMART arm_5 135 176 IPR000225 GO:0005515
Lal21g0310 482 SMART arm_5 264 302 IPR000225 GO:0005515
Lal21g0310 482 SMART arm_5 303 345 IPR000225 GO:0005515
Lal21g0310 482 SMART arm_5 178 218 IPR000225 GO:0005515
Lal21g0310 482 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 230 262 IPR000225 GO:0005515
Lal21g0310 482 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 482 - -
Lal21g0310 482 Gene3D - 65 247 IPR011989 -
Lal21g0310 482 Coils Coil 83 115 - -
Lal21g0310 482 SUPERFAMILY ARM repeat 104 388 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0310 Lal-Chr21 2055533 2057770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0310 81 395 U-box Gene Family AT2G23140 30.696 1.18e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0310 - - gmx:100796229 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0207 17 1255871 1258907 Lal21g0310 21 2055533 2057770 LSH
Lal10g0032 10 355262 359727 Lal21g0310 21 2055533 2057770 PCT
Lal21g0310 21 2055533 2057770 Lal10g0032 10 355262 359727 PCT