Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0302 ATGGGAATATATCTCAGCACCCCCAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGACCATCTTAGATATGGCTTATCATCCATGCAAGGGTGGCGTTCAACAATGGAAGACGCTCATGCTGCACATACTGATCTGGATGAGTCCACTTCATTCTTTGGTGTGTATGATGGTCATGGAGGTAAGGTGGTTGCGAAGTTTTGTGCTAAGTTTCTTCACCGACAGGTGCTCAAAAGTGAAGCATATGCAGCTGGAGATATAGGAACCTCTCTTCAGAAAGCTTTCTTAAGAATGGATGACATGATGCGTGGCCAAAGGGGATGGAGGGAATTAGCAGCCTTGGGAGATAAGATAAACAAGTTTAGTGGGATGATTGAAGGGTTGATTTGGTCTCCACGAAGCAGTGATGGTAAAGAACAAGCTGACGATTGGGTTTTTGAGGAGGGGCCTCATTCTGATTTTGCCGGACCAACTTCTGGAAGCACTGCCTGTGTAGCAGTTATTAGAAACAACCAACTTGTTGTTGCAAATGCTGGTGACTCTCGTTGTGTGATATCTCGGAAGGGTCAGGCTTACAATTTGTCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATCATAAAAGCTGGTGGTTTTATACACGCAGGGCGGATTAATGGCAGTTTAAATCTTGCGAGAGCTATTGGTGATATGGAATTTAAACAGAATAAATATCTTCCCGCTGAAAAACAAATCGTAACTGCCAATCCAGATATAAACACTCTTGAGCTTTGTGATGAAGATGAATTTATGGTGCTAGCTTGTGATGGCATATGGGATTGCATGTCAAGCCAACAATTGGTTGATTTCATTCATGAGCAACTGCACTCAGAAACCAAACCTTCTGCAGTATGTGAAAGAGTACTTGATCGGTGCTTGGCACCATCAACTACCCGTGGCGAGGGATGTGATAACATGACCATGATCTTGGTGCAGTTCAAAAAACATGCTCAGTCAAGTGCACCACCAGAAGAGCACTCTTCAAATGAACAAGTTGAATCTAAACCAAAACAGGAGAGAAGTGAAACTTAG 1080 0.4278 MGIYLSTPKTEKFSEDGENDHLRYGLSSMQGWRSTMEDAHAAHTDLDESTSFFGVYDGHGGKVVAKFCAKFLHRQVLKSEAYAAGDIGTSLQKAFLRMDDMMRGQRGWRELAALGDKINKFSGMIEGLIWSPRSSDGKEQADDWVFEEGPHSDFAGPTSGSTACVAVIRNNQLVVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERIIKAGGFIHAGRINGSLNLARAIGDMEFKQNKYLPAEKQIVTANPDINTLELCDEDEFMVLACDGIWDCMSSQQLVDFIHEQLHSETKPSAVCERVLDRCLAPSTTRGEGCDNMTMILVQFKKHAQSSAPPEEHSSNEQVESKPKQERSET 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0302 359 MobiDBLite consensus disorder prediction 331 359 - -
Lal21g0302 359 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Lal21g0302 359 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Lal21g0302 359 Pfam Protein phosphatase 2C 140 314 IPR001932 -
Lal21g0302 359 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Lal21g0302 359 CDD PP2Cc 23 329 IPR001932 -
Lal21g0302 359 PANTHER PROTEIN PHOSPHATASE 2C 1 341 IPR015655 GO:0004722|GO:0006470
Lal21g0302 359 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 341 - -
Lal21g0302 359 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Lal21g0302 359 SMART PP2C_4 12 327 IPR001932 -
Lal21g0302 359 MobiDBLite consensus disorder prediction 344 359 - -
Lal21g0302 359 Gene3D - 1 330 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0302 Lal-Chr21 2001811 2008770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0302 1 341 PP2C-type Phosphatase Gene Family AT2G25070 78.006 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0302 K17499 - gmx:100787778 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0302 21 2001811 2008770 Lal21g0302 21 2001811 2008770 ECH
Lal8g1576 8 20076629 20080233 Lal21g0302 21 2001811 2008770 PCT
Lal21g0302 21 2001811 2008770 Lal8g1576 8 20076629 20080233 PCT