Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0286 ATGATGCACATGACCTTCTATTGGAGCAAAAACGTTACTCTCCTCATCGATTCATGGAGGACCGATTCGTGGTTGAGTTATGTGTTGAGTTTGGTAGCGTGCATCGTCGCTTCCGTTTTCTACCAATATCTTGAAAATCGCCGAATTCGTTTGAAGTTATTGGCCGCTAGAAAGTCATCTCCGGTTGCGGCGGCGGAGATCCAGGTACCGCTATTGCGACGGAAGCTAATCGGCGGAGATAAAGTGAGGGTTGGTGGAGCGGTGCTGTTTGGGTTGAGTTCGGCGATTGGGTATTTGTTGATGTTGGCGGTGATGTCATACAACGGAGGAGTGTTTGTGGCTATTGTGGTGGGTCTTGCATTTGGTCACTTTATTTTCAGAAGTGAGGGTGAAGAAAACTCCGTTGTTGTTGATAGTTCTTGTGCATGTGCTTAA 435 0.4713 MMHMTFYWSKNVTLLIDSWRTDSWLSYVLSLVACIVASVFYQYLENRRIRLKLLAARKSSPVAAAEIQVPLLRRKLIGGDKVRVGGAVLFGLSSAIGYLLMLAVMSYNGGVFVAIVVGLAFGHFIFRSEGEENSVVVDSSCACA 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0286 144 PANTHER CTR FAMILY COPPER TRANSPORTER 1 144 - -
Lal21g0286 144 Pfam Ctr copper transporter family 4 126 IPR007274 GO:0005375|GO:0016021|GO:0035434
Lal21g0286 144 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 144 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0286 Lal-Chr21 1891626 1892060 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0286 1 144 Inorganic Solute Cotransporters AT5G20650 49.664 2.96e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0286 K14686 - gmx:100795071 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0286 21 1891626 1892060 Lal21g0286 21 1891626 1892060 ECH
Lal7g1048 7 16614074 16614580 Lal21g0286 21 1891626 1892060 ECH
Lal14g1645 14 16782167 16782634 Lal21g0286 21 1891626 1892060 ECH