Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0276 ATGGCGTCATCTTCCGATCTAGATTTGCTTTATCTCTGGCATCTATTTTCTTTTGCTTATTGTAATATCATTGGTTGTGTGATAGGAGAAATTATCAATGCACCTGCACCTGAATTGAAGGAGCAGAAAATTATACTAAAAACCAAATCTGAGGTGGATGTACTTGATGATGGGTACAAATGGCGAAAATATGGGAAGAAAATGGTCAAAAGCAGCCCCTATCCAAGGAACTACTATAAGTGTTCTGCATATGGATGCCCAGTGAAGAAAAGAGTTGAGAGAGAAAGAGATGATCCAACATATGTGATAACAACCTATGAAGGCATTCATACTCATTCTGTTCCTACCTAA 351 0.3789 MASSSDLDLLYLWHLFSFAYCNIIGCVIGEIINAPAPELKEQKIILKTKSEVDVLDDGYKWRKYGKKMVKSSPYPRNYYKCSAYGCPVKKRVERERDDPTYVITTYEGIHTHSVPT 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0276 116 Pfam WRKY DNA -binding domain 56 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal21g0276 116 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 40 114 IPR044810 GO:0003700
Lal21g0276 116 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 40 114 - -
Lal21g0276 116 SUPERFAMILY WRKY DNA-binding domain 48 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal21g0276 116 SMART WRKY_cls 55 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal21g0276 116 Gene3D WRKY domain 40 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal21g0276 116 ProSiteProfiles WRKY domain profile. 50 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0276 Lal-Chr21 1840141 1841914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0276 43 113 WRKY Transcription Factor Family AT5G26170 77.465 6.35e-40 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal21g0276 WRKY 3.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0276 - - lang:109342622 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0276 21 1840141 1841914 Lal21g0276 21 1840141 1841914 ECH