Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0263 ATGGAGACTGTTATGTACAATGCTCCAATGAACATTTCTGGCCGATATTCCGCTGTCATAGATGAAATATCACAACATTCCATCTCAAATCCACTCATTCAATCCTATTCATTTGTTGACCTTAATAACCAAACTCATATCATACATGGAATTTCAATGCTTGCTGGAGAGCATGGTGAACAACCTATAAGTAATATAATTTCTGAAGTTCCCTTCATAAACCCTGCAAGTATTGCTAACTCTAGTTCATTAGTCACATCACAAGGAAAAACTGTTGTGGGAGATTCCTCAAATGGCATAAACAACACTGAGTATCAAGAGCATATAGCTGCAGGAATGCCAATTACTCCTGTTTCACTTGCTGCCATTCTTGCTGCTAGAATTGATCTTGAAGAAAATTTAGATAATTTAACAGCTTTGCCTCCTTTAATGGGGGCAGTGGAGCCGTATATCTTCAATAATTGGCAACCTACTTCAGACCCTTTGTCTGCAACTTTCCAGAATCGTGGTTACGAGAAAGTACCTCATCGTGGTTACGATGAAGTACCTGGTGGTAGTATGTGGAACAATGTCAACAAGTTTCCTAAAGCAACAGAGATTGTTGAAACTGTGTGCCAGCCTTATTCACCCATAGGAAACATTGATCCAAATGGATGGACATCAAATATTGCTAACTTGACCAATCATTCTTACAACTCCTCTAACTTTAGTAGCGAACTCTCTTTAAGTCTTGCAACATCACGAACCGCAGGACAGTGCTCTGAGGCCAGTTGCCCTGATGTCAACAGCAATAGAGAACTTGCTATGGGTTCTAAGAAATATGTGCAGTTTTCACCATTAGTATTGGGATCGAGATATCTTATTGGAATCCAACAGATACTTGCTCAAATTGCGAAATATTCATTTGAAGACGTAAAACAGATAAATGGTTCAGCTGCTGGCACTAGAGCAGGTGGATATAAATCAAGCTCCACTTTCCCAACCATGAGAAGTGTGTTGGTAAATGACAAGGAAAATTCCATGTTTGAAGAACTTCATGCAAAATCTCCTTTGCAAAGGCATGCGGCCGAATCAAAGAAATCCCAACTTCTGGTACTACTACAGCTGGTGGACGATCAATATAGCCAGTGTTTGGATGAGATACATACTGTTGTGTCCGCATTCCATGCTGCTGCAGAACTAGACCCTCAAATACATGCTCATTTTGCTCTTCAAAGGATCTCTATCCTATACAAGGAGTTTCGAGAGAGGATTAGCAGTCATATACTTGGGATTGGATCAGATTTTAACAAATCTTGCTCAGACGAGAATAATGACTGGTGTGTTGAAACTTCATTCATTCAAAAGCAATGGGCTCTTCAGCAGTTGAAAAGAAAAAATCATCAGTTATGGAGACCCCAAAGAGGGTTGCCAGAAAGATCTGTCTCAGTTCTAAGGGATTGGATGTTTCAGAATTTCCTCCATCCGTATCCTAAAGATGCAGAGAAGCATTTACTTGCAGTGAAAAGTGGATTGACAAGAAGCCAGGTATCTAATTGGTTTATAAATGCTCGTGTTCGGCTGTGGAAACCCATGATTGAGGAAATGTATGCAGAAATGAAAGCAAGAAAGGCTTGTCGAAATGAACAAGGAATGGAGAGCAGCCATGGAAACAGGAGAATAAGCATGACCCATCTGAATTGA 1683 0.4017 METVMYNAPMNISGRYSAVIDEISQHSISNPLIQSYSFVDLNNQTHIIHGISMLAGEHGEQPISNIISEVPFINPASIANSSSLVTSQGKTVVGDSSNGINNTEYQEHIAAGMPITPVSLAAILAARIDLEENLDNLTALPPLMGAVEPYIFNNWQPTSDPLSATFQNRGYEKVPHRGYDEVPGGSMWNNVNKFPKATEIVETVCQPYSPIGNIDPNGWTSNIANLTNHSYNSSNFSSELSLSLATSRTAGQCSEASCPDVNSNRELAMGSKKYVQFSPLVLGSRYLIGIQQILAQIAKYSFEDVKQINGSAAGTRAGGYKSSSTFPTMRSVLVNDKENSMFEELHAKSPLQRHAAESKKSQLLVLLQLVDDQYSQCLDEIHTVVSAFHAAAELDPQIHAHFALQRISILYKEFRERISSHILGIGSDFNKSCSDENNDWCVETSFIQKQWALQQLKRKNHQLWRPQRGLPERSVSVLRDWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMKARKACRNEQGMESSHGNRRISMTHLN 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0263 560 CDD homeodomain 464 525 IPR001356 GO:0003677
Lal21g0263 560 SMART prehox3 275 420 IPR006563 -
Lal21g0263 560 Gene3D - 459 539 - -
Lal21g0263 560 MobiDBLite consensus disorder prediction 541 560 - -
Lal21g0263 560 PANTHER HOMEOBOX PROTEIN ATH1 12 554 - -
Lal21g0263 560 ProSiteProfiles 'Homeobox' domain profile. 461 524 IPR001356 GO:0003677
Lal21g0263 560 SMART HOX_1 464 528 IPR001356 GO:0003677
Lal21g0263 560 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 12 554 - -
Lal21g0263 560 Coils Coil 120 140 - -
Lal21g0263 560 Pfam Homeobox KN domain 481 520 IPR008422 GO:0003677|GO:0006355
Lal21g0263 560 Pfam Associated with HOX 281 419 IPR006563 -
Lal21g0263 560 SUPERFAMILY Homeodomain-like 466 532 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0263 Lal-Chr21 1750274 1752402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0263 239 537 Homeobox Transcription Factor Family AT4G32980 56.311 2.89e-105 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lal21g0263 POX 8.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0263 - - lang:109343832 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0263 21 1750274 1752402 Lal21g0263 21 1750274 1752402 ECH
Lal21g0263 21 1750274 1752402 Lal4g0163 4 1021117 1025153 LSH