Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0235 ATGAATGATGATGTTTCGTCCAGTCAAATGTGTTTTGAATTAGAGTTTGGAGATGAAGAATTTCAATTAAATCACGAGGATTATGGTGTTTCAGATGATGAACATTTGGGTATTTTGATTGAGAAAGAGACCCATCTTTGCTTCAAAAAAGATCAAGCTTTGGTTTCAGATGAATGGATGAAACGTGCACGAACTGATGCAATCAATTGGATCCTCAAAACAAGAGCAGCATTGGGTTTTCGCTTGCAAACAGCTTATTTATCTGTCACATACTTTGATCGATTCATTTCCACAAGATCCATTAATAGTGAAAAGCATTGGGCAATTCGGTTACTTTCACTTGCATGCCTTTCTCTTGCTGCTAAGATGGAAGAGTGCAATGTTCCGGGTCTACCAGATTTTCAATTGGAAGAAGATTATTGCTTTGAGAGTAAAGTGATTCAAAGAATGGAACTTTTTGTTCTGACCACATTGGAATGGGATATGGCTATTATCACACCCTTTGATTTTCTTCCTTATTTGATCCCAAGGCTATGCAATGAATCTCAACCAAATAATATTTTATATAAGGCTACTATGCAACTCATCTTCACCACAATGAAAGAGGTCAATTTAATGGATCACAAGCCATCTTTTATTGCAACTTCAGCTACTTTAGTGGCATTGGATCAGAAATTGACAATAGAAGATGTAGAGTTGAAGATCAAGTCAATACCTCAACATATGAGGTTTCTTGAACTTAAAGGTGTATTTGATTGTTACAATATAGTTCAAAGATTATACATAGAGAGAACTAGAAGAGACAAGCTCTTACATACACCTGGTTCCTCACTAATCAGGTCTAAGCCACTTGATATGACTGAGAACTCTCTAGTCAATTCTGCTACTATGTCTAAAAGAAGAAGACTCACATTTGATGATGATAAACAGGGTTGTGATGGAAATGGAAGTGACTCCACTAAGGAAAATCCAAAATTGTGA 981 0.3609 MNDDVSSSQMCFELEFGDEEFQLNHEDYGVSDDEHLGILIEKETHLCFKKDQALVSDEWMKRARTDAINWILKTRAALGFRLQTAYLSVTYFDRFISTRSINSEKHWAIRLLSLACLSLAAKMEECNVPGLPDFQLEEDYCFESKVIQRMELFVLTTLEWDMAIITPFDFLPYLIPRLCNESQPNNILYKATMQLIFTTMKEVNLMDHKPSFIATSATLVALDQKLTIEDVELKIKSIPQHMRFLELKGVFDCYNIVQRLYIERTRRDKLLHTPGSSLIRSKPLDMTENSLVNSATMSKRRRLTFDDDKQGCDGNGSDSTKENPKL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0235 326 CDD CYCLIN 64 155 IPR013763 -
Lal21g0235 326 PANTHER CYCLINS 35 274 IPR039361 -
Lal21g0235 326 SUPERFAMILY Cyclin-like 31 162 IPR036915 -
Lal21g0235 326 Pfam Cyclin, N-terminal domain 39 162 IPR006671 -
Lal21g0235 326 ProSitePatterns Cyclins signature. 64 95 IPR006671 -
Lal21g0235 326 MobiDBLite consensus disorder prediction 303 326 - -
Lal21g0235 326 Gene3D - 49 163 - -
Lal21g0235 326 Pfam Cyclin, C-terminal domain 165 263 IPR004367 -
Lal21g0235 326 Gene3D - 39 228 - -
Lal21g0235 326 PANTHER CYCLIN-D5-1 35 274 - -
Lal21g0235 326 SMART cyclin_7 69 156 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0235 Lal-Chr21 1555051 1557482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0235 32 278 Core Cell Cycle Gene Families AT3G50070 36.400 3.03e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0235 K18811 - gmx:100798728 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0235 21 1555051 1557482 Lal21g0235 21 1555051 1557482 ECH