Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0225 ATGAAGACACGTGCCAGCAAGAGGAAATCTAGCGCAGCCAATGTTTCCGATGTTGAAGATCAAAACTCAATGAAGAAACAGCGCGTTGTGTTGGGTGAAATTTCAAATTCAAACAATGTCTCTGTGTCTCCAATTTCGAATCCTGAGGTATCAGGAAGAGTTAGGAATTCTAGGATCAAGAGGGTAGCGGCTACAAGGAAGGCTCTTTCTTCTGTTGATTCCAATATTGATACTGAGAATAAGGCACCAGAAAGTTTCACTGAAAAATCAATAACCGAAGTCAAGTTCAGTGACCCACAGAACTGTGAACCTTTTGTTCATGAGATCGATTCTTATCTTTGCAGTATGGAGAGGGAAATAAAGAGAAGACCGATATTTAACTACATTGAAAGAGTTCAGTGTGAAGTTACCACTCAAATGAGAGGGATATTGGTGGATTGGATGGTTGAAGTTGCAGAAGAATACAAGCTTTTACCAGATACTCTTTTTCTTTCGGTATCGTATGTTGATAGGTTTCTGTCACTTAATCGTGTACCTAAGCTCAAACTTCAATTGTTGGGAGTTTCTTCAATGCTAATTGCAGCTAAATATGAAGAAATGACCCCGCCTCATGTGGAAAATTTCGTGTTGATAACTGATAGCACTTATAATAAGTCAGAGGTTGTGAAAATGGAAGCTGATATACTCAAATCCCTGAGATTTGAAATTGGAAATCCTACTGCTAAGACTTTTGTTAGGAGGTTTGCGGGAATTGGTTGTGAGAATAACAAAGCTAAAAAGCTGAAGTTTGAGTGTTTATGTAACTATCTTGTTGAGCTGAGTTTGCTGGAATATTGTTGTTTGAAGTTTTTGCCTTCTTTGGTGGCTGCATCTGCTACATTTCTAGCTAGATATATCACTTGGCCTAAATTGCATCCTTGGACTACAACCCTGTGTAAATTCACTGGTTATAATGCTGCTGATTTGAAAGAATGTGTTCTTGTCTTACATGAATTGTTTATGGCAAGAAAGGGAGGGTCTTTCCCAGCCATTAGGGAGAAATACAAGCAACACAAGTTCAAAAATGTGGCATACCTACCTTCACCTCCACAACTACCAAGATCTCTCTTTGAAGACGAGTAA 1122 0.3886 MKTRASKRKSSAANVSDVEDQNSMKKQRVVLGEISNSNNVSVSPISNPEVSGRVRNSRIKRVAATRKALSSVDSNIDTENKAPESFTEKSITEVKFSDPQNCEPFVHEIDSYLCSMEREIKRRPIFNYIERVQCEVTTQMRGILVDWMVEVAEEYKLLPDTLFLSVSYVDRFLSLNRVPKLKLQLLGVSSMLIAAKYEEMTPPHVENFVLITDSTYNKSEVVKMEADILKSLRFEIGNPTAKTFVRRFAGIGCENNKAKKLKFECLCNYLVELSLLEYCCLKFLPSLVAASATFLARYITWPKLHPWTTTLCKFTGYNAADLKECVLVLHELFMARKGGSFPAIREKYKQHKFKNVAYLPSPPQLPRSLFEDE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0225 373 CDD CYCLIN 239 330 IPR013763 -
Lal21g0225 373 CDD CYCLIN 140 229 IPR013763 -
Lal21g0225 373 PIRSF Cyclin_A_B_D_E 1 371 IPR039361 -
Lal21g0225 373 SMART Cyclin_C_2 239 362 IPR004367 -
Lal21g0225 373 PANTHER CYCLIN-A3-1-RELATED 20 372 - -
Lal21g0225 373 Gene3D - 108 357 - -
Lal21g0225 373 Gene3D - 122 237 - -
Lal21g0225 373 SUPERFAMILY Cyclin-like 239 364 IPR036915 -
Lal21g0225 373 ProSitePatterns Cyclins signature. 141 172 IPR006671 -
Lal21g0225 373 MobiDBLite consensus disorder prediction 1 27 - -
Lal21g0225 373 SMART cyclin_7 146 230 IPR013763 -
Lal21g0225 373 SMART cyclin_7 243 331 IPR013763 -
Lal21g0225 373 Pfam Cyclin, C-terminal domain 239 361 IPR004367 -
Lal21g0225 373 Pfam Cyclin, N-terminal domain 116 236 IPR006671 -
Lal21g0225 373 PANTHER CYCLINS 20 372 IPR039361 -
Lal21g0225 373 SUPERFAMILY Cyclin-like 97 236 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0225 Lal-Chr21 1487474 1489788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0225 1 372 Core Cell Cycle Gene Families AT5G43080 51.075 6.77e-127 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0225 K06627 - zju:107420528 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0225 21 1487474 1489788 Lal21g0225 21 1487474 1489788 ECH