Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0221 ATGAACCTCGGAGAAATGCACATCCCAATCTTCTTCCTTCTCATTCTCTTTGCCTCAACTTCATTTGCTACAGATACACTCACACAAAGTTCTTCTCTTTCAATTGACAAAACAAACGATTCCCTTGTCTCCACCAATGGTGATTTCTCCGCTGGTTTCTTCCAAGTTGGAGAAAACGCTTTCTGCTTTTCCATAATCTTCACAAAATCTATAAAACCCACCGTTGTTTGGATGGCAAACCGAGATGAACCCGTTAACGGCAAAGACTCTAAACTAACACTTTTGAAAAACGGCAACCTCGTTTTGATTGACGCAGGAAGAACCACAATTTGGACAACCTCAGTAGTTACCTCTCTCCAAGTAGAGCTGAAACTCAAAAACAACGGCAACCTTGTACTTCGTACCGTACGAAGAGGTGAAGGAACTGTGCTATGGCAAAGCTTTGATTCTCCAACGGATACCCTTCTTGCCGGTCAACCGGTAACGGAAAAAGCAAGCCTTGTTTCATCAAGAAGCGAAACTAATTACTCATCCAGTTTCTATAGACTTTACTTCGATAATGATAACATTCTTCGTCTTATTTACAAAGCTCCTTCGTTGTCCAGCGTGTACTGGCCAGAACCGTGGAAACCTGCCGTTGATCTTGGTAGATTGGCCTATAACATATCTAAAACCGCGGTTCTAGATGGTAATGGCAAGTTCACTTCTTCTGATGGATTTCAATTCATTTCTTCGGACTACCAAACGAGAGTGTATAGGCGCGTCTTGATGGACCCCGATGGTAACTTGCGTCTTTATAGTTTCAATGAGGATAGTAGAACTTGGGATGTAACATGGCAAGCGATTAAACAACCGTGTATAGTTCATGGGATTTGTGGTGCTAATAGCATGTGTACTCATGATGTTACTGGAAGGAGTTGTTATTGCTTGCAAGGTTTTAAGGTTAAGGATCCTAATGATTGGACTCAAGGGTGTGAGCCTGAGTTTAGTTCTTCTGATATTATTTGCAATAACAGTGATTCTGCAAGTTTTGTTCATCTTCCTCACACCGAGTTTTATGGCTATGATGTGGGCGTGTACCGCGTTACAAGCTTGAAAGAATGTGTGGATATATGCTTGAAACTTTGTGATAATTGCAAAGGTTTTCAATTCAAGTTCAATGAGATTGCTACTTATAACTGTTATCCTAAAACAATCTTGCTCAATGGAAGGGATACACCGAATTTCGATGGAGAAAGCTATCTAAAGCTGCCAAATGCAACCGCGATAACTTCAAAGAAGTCCCTTAAACATTCACCCTTGAATTGTTCCGTTTCCTTGTCTCAACCACTGAATAGAACTTACCAAAAGGCAAAAAGAAACACCACTTTGAGTTTCTTAGTATGGTTTGCTACCGGGGTTGCGGTGTTTGAGATATCAGTTATTTTTCTTGTGTGGTTCTTTTTGTTTAGAACCAACAAGCAATCAAATGATGGAGATCAACATCGACACCTTCTCTCTGCAACCGGATTCGAAAGGTTCACATACTCAGAACTCAAACGCGCCACAAAGGGGTTCACTGAAGAAATTGGAAGAGGAGCAGGAGGTGTTGTATACAAAGGAACCCTCTATGATAATCGTGTTGCAGCTATCAAACGATTAGGTGAAGCAAATCAAGGAGCAGCTGAATTTCTTGCAGAAATAAGCACCATTGGTATGTTGAACCATATGAATTTGATTGATATGTGGGGATACTGCGTTGAAGGGAAGCATAGAATGTTGGTGTACGAGTACATGGAACATGGATCATTATCTGAGAATCTTTTCTCTAATGCACTTGATTGGAAAAAGAGGTTTAATATAGCTTTAGGCACAGCAAGAGGTTTGGCTTACTTACACGAAGAGTGCTTGGAATGGGTTTTACATTGCGATGTGAAACCTCAAAACATTCTCCTAGATTCTGATTTTCAACCCAAGGTTGCAGATTTTGGCTTATCAAAGCTTCTGAACAGAGATGAGCGTGGTAGTTCTAACATTGCTTTCTCTAGAATGAGAGGAACACGAGGGTACATGGCTCCTGAGTGGGTTTACAACCTTAGGATTACGTCAAAGGTTGATGTTTATAGCTATGGAATTGTGGTGTTGGAAATGGTAACAGGAAAAAGTGCAATGGAAATTCATAGTGTTCAGATTGGTGGTGGCATAGAGCAACGTAGGTTGCTGACGTGGGTGGATGAGAAGGTTAAGAATGCTCCAACAAGTAGGTTTTGGATTGAGGAGATAGCAGATCCAAAATTGGAAGGGAAATACAATGTTTCACAGGTTGAGGTTTTGGTGAATGTGGCATTGCAGTGTGTGCAAGATGACATGAATGATAGACCCTCTATGAGCCAAGTAGTGGAGATGCTTCAATAG 2394 0.4106 MNLGEMHIPIFFLLILFASTSFATDTLTQSSSLSIDKTNDSLVSTNGDFSAGFFQVGENAFCFSIIFTKSIKPTVVWMANRDEPVNGKDSKLTLLKNGNLVLIDAGRTTIWTTSVVTSLQVELKLKNNGNLVLRTVRRGEGTVLWQSFDSPTDTLLAGQPVTEKASLVSSRSETNYSSSFYRLYFDNDNILRLIYKAPSLSSVYWPEPWKPAVDLGRLAYNISKTAVLDGNGKFTSSDGFQFISSDYQTRVYRRVLMDPDGNLRLYSFNEDSRTWDVTWQAIKQPCIVHGICGANSMCTHDVTGRSCYCLQGFKVKDPNDWTQGCEPEFSSSDIICNNSDSASFVHLPHTEFYGYDVGVYRVTSLKECVDICLKLCDNCKGFQFKFNEIATYNCYPKTILLNGRDTPNFDGESYLKLPNATAITSKKSLKHSPLNCSVSLSQPLNRTYQKAKRNTTLSFLVWFATGVAVFEISVIFLVWFFLFRTNKQSNDGDQHRHLLSATGFERFTYSELKRATKGFTEEIGRGAGGVVYKGTLYDNRVAAIKRLGEANQGAAEFLAEISTIGMLNHMNLIDMWGYCVEGKHRMLVYEYMEHGSLSENLFSNALDWKKRFNIALGTARGLAYLHEECLEWVLHCDVKPQNILLDSDFQPKVADFGLSKLLNRDERGSSNIAFSRMRGTRGYMAPEWVYNLRITSKVDVYSYGIVVLEMVTGKSAMEIHSVQIGGGIEQRRLLTWVDEKVKNAPTSRFWIEEIADPKLEGKYNVSQVEVLVNVALQCVQDDMNDRPSMSQVVEMLQ 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0221 797 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Lal21g0221 797 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Lal21g0221 797 SMART serkin_6 517 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0221 797 ProSiteProfiles PAN/Apple domain profile. 336 420 IPR003609 -
Lal21g0221 797 Pfam S-locus glycoprotein domain 245 316 IPR000858 GO:0048544
Lal21g0221 797 CDD STKc_IRAK 523 797 - -
Lal21g0221 797 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 6 796 - -
Lal21g0221 797 PIRSF SRK 3 797 IPR024171 GO:0004674
Lal21g0221 797 ProSiteProfiles Protein kinase domain profile. 517 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0221 797 Gene3D - 19 149 IPR036426 -
Lal21g0221 797 CDD B_lectin 30 151 IPR001480 -
Lal21g0221 797 SMART blect_4 33 151 IPR001480 -
Lal21g0221 797 Gene3D Transferase(Phosphotransferase) domain 1 592 797 - -
Lal21g0221 797 Pfam D-mannose binding lectin 74 162 IPR001480 -
Lal21g0221 797 SUPERFAMILY Protein kinase-like (PK-like) 496 796 IPR011009 -
Lal21g0221 797 Pfam Protein kinase domain 520 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0221 797 PANTHER OS07G0415500 PROTEIN 6 796 - -
Lal21g0221 797 CDD PAN_AP_plant 333 418 - -
Lal21g0221 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 206 IPR036426 -
Lal21g0221 797 Gene3D Phosphorylase Kinase; domain 1 483 591 - -
Lal21g0221 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0221 Lal-Chr21 1465956 1468349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0221 406 797 Receptor kinase-like Gene Family AT5G45780 34.901 1.53e-65 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lal21g0221 Pkinase 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0221 - - gmx:100816469 1182.55