Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0214 ATGACACACACAAAACCTGTTCATCCTAAAGTTGTTCTGACTCAGGCTTCTTCAAGAATGACGAACATGAAACAGTTATATTATATGTTGCTGTTCCTCCTCTCAAATTCATGTCTCTCCCTCTCACTATCATCACCACTCGATGGCGAAGCCTTACTTGCATTCAAATTAAAAGCTGATCTAAACAACAAACTCCAATATCATCCTTCTCTCAACTCCACCACTCTCACATTTTGTCACTGGCAAGGTGTACAATGCAACCATCACAAAATAACACATCTTCTTCTACAACACTTAGATCTTGTTGGTGTTTTCGCTCCAAACACATTATCACGTCTTGATCAACTTCGAGTCCTTAGTTTACATAACAACTCTCTCACTGGACCTATACCTGATCTTACTGGTTTCTATAATCTTAAATCACTCTTCCTTCATAATAACCGTTTCTCTGCTTCACTTCCTCCTTCACTTTTCTCTCTTCATAGGCTTCGAACTCTTGATTTTTCTCATAATAACCTTTCTGGACCGATTTCGACCCGGTTTATTAACTTAGACCGGCTCATCTATCTCCGGCTCAGTTATAACAACTTCAACGGAACTGTTCCACCTCTTAACCAGTCTTCTCTCAAAACCTTTGACGTTTCCGGTAACAACCTCACCGGCGCTATTCCGGTAACCCCTGCATTGTTCCGGTTTGGACCTTCCTCCTTCTCTTCTAACCCAGGCCTCTGTGGCGAGATCATCCACAAAGAATGCCACCCTACCACACCTTTCTTCGGTAACACAACTTCAGCGTCGCCGCCTCCGGTGGCCACGGTGAGCCAGAGCGCGCAAATGCATGGCGGTGTTGACGGTTTAATCCGGCAGCCATACTCCAAAAAGCATAACCGTAAAGCATTGGTCATCGGACTCTCAATCGGAATATTCGTTCTGATGGTTTCGCTATTTATCTTCGCCGTAACAATTAAGAAAAACAGAAAGAAGAAGCAAAGTTCGGATGATTTGAGTTCCGATGCAGCGGCGACAGCGGAAGCAGCGGCGGTGATGCAAATGGAGCAAGAGAGGGAGTTAGAGGAGAAAATAAAGAGAGTGGAAGTAGCGAAAAGCGGGAACTTAGTATTCTGTGCGGGTGAGGTGCAGGTTTATACGGTGGAGCAGTTAATGAAGGGTTCAGCGGAAGTATTAGGGAGGGGTAGTTTGGGAACAACGTATAAGGCGGTGTTGGATAACCGTTTAATCGTGACCGTTAAAAGGTTTGATGGTACGAAGATGGGTGCACATGCAAATAAACAAGTGTTCCAGCGTCACATGGAATCAGTGGGAGGGCTTCGACATCCGAATTTGGTTCCACTTAGGGCTTATTTTCAGGCAAAGGAAGAAAGGCTAATTATCTATGATTACCAGCCTAATGGAAGTCTCTTTTCACTTATTCACGGTTCCAAATCAAGTAGGGCAAGGCCATTGCACTGGACATCATGCCTAAAAATAGCAGAGGACGTAGCACAAGGGCTGTCCTACATCCACCAAGCATGGAGACTAGTCCATGGCAATCTCAAGTCCTCAAATGTTCTTCTTGGACCTGATTTTGAGGCATGCATCACAGACTACTGCCTCACAGTATTGGCCAACCCATCCAGCTTTAGTGAAGATGTTGTTTCTGCAGCCTATAGAGCTCCAGAAACCCGCAACTCAAATCACCAACCAACACCGAAATCGGATGTTTATTCTTATGGCATTTTGTTGCTAGAGATTATAACTGGAAAATCTCCTTCTGAGTTACCATTCTTAGTTCCTGGTGATATGTTAAGTTGGGTAAGGTCCATGAGGGATGACAATGGGGGTGAAGACAGCAGAATGGACATGCTTCTTCAGGTTGCTACAACTTGTAGCTTGATCTCTCCTGAGCAGAGGCCCACTATGTGGCAGGTCCTGAAGATGTTGCAGGAAATCAAAGAGATTGTATTAGTGGAAGATGGTGACTTGGATCTACGCACTAATGTCATGCCCTAA 2010 0.4463 MTHTKPVHPKVVLTQASSRMTNMKQLYYMLLFLLSNSCLSLSLSSPLDGEALLAFKLKADLNNKLQYHPSLNSTTLTFCHWQGVQCNHHKITHLLLQHLDLVGVFAPNTLSRLDQLRVLSLHNNSLTGPIPDLTGFYNLKSLFLHNNRFSASLPPSLFSLHRLRTLDFSHNNLSGPISTRFINLDRLIYLRLSYNNFNGTVPPLNQSSLKTFDVSGNNLTGAIPVTPALFRFGPSSFSSNPGLCGEIIHKECHPTTPFFGNTTSASPPPVATVSQSAQMHGGVDGLIRQPYSKKHNRKALVIGLSIGIFVLMVSLFIFAVTIKKNRKKKQSSDDLSSDAAATAEAAAVMQMEQERELEEKIKRVEVAKSGNLVFCAGEVQVYTVEQLMKGSAEVLGRGSLGTTYKAVLDNRLIVTVKRFDGTKMGAHANKQVFQRHMESVGGLRHPNLVPLRAYFQAKEERLIIYDYQPNGSLFSLIHGSKSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLTVLANPSSFSEDVVSAAYRAPETRNSNHQPTPKSDVYSYGILLLEIITGKSPSELPFLVPGDMLSWVRSMRDDNGGEDSRMDMLLQVATTCSLISPEQRPTMWQVLKMLQEIKEIVLVEDGDLDLRTNVMP 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0214 669 Pfam Protein kinase domain 393 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0214 669 SUPERFAMILY Protein kinase-like (PK-like) 393 648 IPR011009 -
Lal21g0214 669 Gene3D Ribonuclease Inhibitor 206 254 IPR032675 -
Lal21g0214 669 Gene3D Ribonuclease Inhibitor 47 205 IPR032675 -
Lal21g0214 669 Gene3D Transferase(Phosphotransferase) domain 1 469 659 - -
Lal21g0214 669 ProSiteProfiles Protein kinase domain profile. 389 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0214 669 Gene3D Phosphorylase Kinase; domain 1 346 467 - -
Lal21g0214 669 SUPERFAMILY L domain-like 57 243 - -
Lal21g0214 669 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 659 - -
Lal21g0214 669 Pfam Leucine rich repeat 138 197 IPR001611 GO:0005515
Lal21g0214 669 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 23 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0214 Lal-Chr21 1405122 1409622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0214 48 661 Receptor kinase-like Gene Family AT5G43020 56.962 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal21g0214 Pkinase 3.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0214 - - gmx:100817172 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0214 21 1405122 1409622 Lal21g0214 21 1405122 1409622 ECH
Lal21g0214 21 1405122 1409622 Lal4g0131 4 808327 815908 LSH