Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0211 ATGGAAGAAGAAAGAGAGTGTTGTTCCACAGATTCAACCATCAAAAGAACCAACAACAGAAGCAGAAATTCTCCTCCTTCTTCAGAGAAACGCAAGAAACAACATCAAGATAAGCCATACAGAGGAATAAGGATGAGGAAGTGGGGGAAGTGGGTTGCTGAAATTAGAGAACCAAACAAAAGGTCAAGAATTTGGTTAGGTTCTTACACAACCCCTATCGCCGCCGCACGCGCCTACGACACCGCCGTGTTCTACCTGAGGGGCCCTTCTGCTCGTCTCAACTTCCCTGACTTATTGTTCCAAGATCAAAACGACAACGTTTCGGTTCAACAAGGTGACATGTCAACCGATTCAATAAGGAAAAAGGCCACACAAGTTGGTGCTAGAGTGGATGCTCTTCTTCTTCAGTCTTCGTCTAACTCCGCTTCGAATCAAATCAAATATGAGAAACCAGACTTGAACGAGTATCCAAAACCAGATGAAGATTCATCACTTGACCTTGATATTTAG 510 0.4392 MEEERECCSTDSTIKRTNNRSRNSPPSSEKRKKQHQDKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPDLLFQDQNDNVSVQQGDMSTDSIRKKATQVGARVDALLLQSSSNSASNQIKYEKPDLNEYPKPDEDSSLDLDI 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0211 169 MobiDBLite consensus disorder prediction 1 40 - -
Lal21g0211 169 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Lal21g0211 169 MobiDBLite consensus disorder prediction 151 169 - -
Lal21g0211 169 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 5 161 - -
Lal21g0211 169 MobiDBLite consensus disorder prediction 25 40 - -
Lal21g0211 169 MobiDBLite consensus disorder prediction 140 169 - -
Lal21g0211 169 Pfam AP2 domain 40 88 IPR001471 GO:0003700|GO:0006355
Lal21g0211 169 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Lal21g0211 169 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Lal21g0211 169 PRINTS Ethylene responsive element binding protein signature 78 98 IPR001471 GO:0003700|GO:0006355
Lal21g0211 169 SUPERFAMILY DNA-binding domain 39 97 IPR016177 GO:0003677
Lal21g0211 169 CDD AP2 40 98 IPR001471 GO:0003700|GO:0006355
Lal21g0211 169 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Lal21g0211 169 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 5 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0211 Lal-Chr21 1374449 1374958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0211 1 144 AP2-EREBP Transcription Factor Family AT1G46768 59.722 8.37e-54 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal21g0211 AP2 1.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0211 K09286 - gmx:732579 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0211 21 1374449 1374958 Lal21g0211 21 1374449 1374958 ECH