Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0207 ATGAGTTCCCCTGCCATTCAACACATTTCGGAATGTTTCATCAAGTTACAACACCCTATTGAAGAGTCTAATCAAATATGCTATTTAGCACCAGGAGATATTGCTATGTTGTCTGCACATTACATCCAGAAGGGTCTGCTCTTCAACAAGAATCAACAATTTTGTATCAATAATCTATTGGACAAACTCAAGCAATCTCTTTCTCTTGCCCTTGTCCACTTCTATCCTTTGTCTGGCCGCCTTGTTACTCGAAAAACCGAAGATCCTCCCACTTATGTTACTTTCGTCGATTGTAGCAGTAATAGTCCTGGAGGTGGATTTATATATGCAACTTTAGATATGACTGTATCTGATATCCTCTCCCCTATTGATGTCCCACCTATTGTTCAGTCATTGTTTGATCTTCACAAGGCAGTAAATCATGATGGCCACACTATGCCTTTGTTATCCATTCAAGTTACTGAACTATTGGATGGTGTTTTCATAGGATGTTCCATGAATCATAGTATTGGTGATGGCACTTCCTATTGGAATTTCTTTAATACATGGTCTGAGATTTTTCAATCTCAAGGCCAAGGGCATGATCATGATATTCTTATTTCACACCAACCTATTCACAATCGTTGGTTTCCGGAGAGTTGCGATCCACTTATCAATCTTCCATTTAAGCATCATGATGAGTTCATTAGCAGATTTGAAACACCCAAGTTGAGAGAAAGGATTTTTCACTTCACAGCAGAATCAATTGCAAAACTGAAAGCAAAGGCCAACAAAGAATCCAAAACAACCAAAATCTCTTCATTCCAATCCTTGTCAGCACTTGTTTGGACATCGATAACTCGTGCCCGAAACCTACCACATGATCAGGTATGTAGCTGCAAATTAGCCGCAAACAGTCGAACACGAATGGAACCACCTATGGCGCAAGAGTACTTCGGCAATTTAGTACAATTAGTGAGTGCAGGAACAACAATAAGGGAATTGCTTGAACACAATCTAGGATGGGCAGCATGGAAGGTTCACCTTGCTGTTGCAAATCATAACAACACAATGGTGCAACTATCCTTCAATGAGTGGTTACTGTCTCCTGTTGTTTATCAAATTGCTCGCAATTTCGACTCAAATAGTGTGTTGATTAGTAGTTCACCAAGATTCAACATGTATGGTAATGAATTTGGAATGGGAAAAGCTGTTGCAGTTAGAAGTGGCTATGCAAACAAATATGATGGTAAAGTAACATCATATCCTGGCCATGAAGGAGGGGGAAGTGTGGATTTGGAAGTGTGTCTTATGCCAGATACAATGGGTGCATTGGAATTAGACCAGGAGTTTATGACTGCTGTTTCTGTTTCCAATCCCTTATAA 1365 0.3978 MSSPAIQHISECFIKLQHPIEESNQICYLAPGDIAMLSAHYIQKGLLFNKNQQFCINNLLDKLKQSLSLALVHFYPLSGRLVTRKTEDPPTYVTFVDCSSNSPGGGFIYATLDMTVSDILSPIDVPPIVQSLFDLHKAVNHDGHTMPLLSIQVTELLDGVFIGCSMNHSIGDGTSYWNFFNTWSEIFQSQGQGHDHDILISHQPIHNRWFPESCDPLINLPFKHHDEFISRFETPKLRERIFHFTAESIAKLKAKANKESKTTKISSFQSLSALVWTSITRARNLPHDQVCSCKLAANSRTRMEPPMAQEYFGNLVQLVSAGTTIRELLEHNLGWAAWKVHLAVANHNNTMVQLSFNEWLLSPVVYQIARNFDSNSVLISSSPRFNMYGNEFGMGKAVAVRSGYANKYDGKVTSYPGHEGGGSVDLEVCLMPDTMGALELDQEFMTAVSVSNPL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0207 454 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 448 - -
Lal21g0207 454 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 448 - -
Lal21g0207 454 Gene3D - 226 440 IPR023213 -
Lal21g0207 454 Pfam Transferase family 26 445 - -
Lal21g0207 454 Gene3D - 1 222 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0207 Lal-Chr21 1351910 1353274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0207 63 439 Monolignol Biosynthesis Gene Families AT5G48930 27.665 2.23e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0207 - - gmx:100775661 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0207 21 1351910 1353274 Lal21g0207 21 1351910 1353274 ECH