Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0202 ATGTGTGGTTGTAATGAAAGTGGCATTTCTTTAGCACTAGGTTTGTGGTCCTCAATCACGACCAGAGCAGATAATCAGGAAACAATGGCTGTAGCAATAGGAAGAAGCTTCACTTTTCAGCCATGCTCTTTATTCAACAATAAGGGTGTAGATAAAACTTCACCTCTGGGAAGACACCCGTGGCTGGGATCTGATGCAGCTGCTGCAAGAGCAGGAGTCACTCAACATAAAAGGCGAATTTCTGTTGCAGCGCAACAGCGACCTACATGGCTTCCAGGACTTGATCCCCCACCTTATCTTGATGGAACTCTGGCTGGAGATTTCGGGTTCGACCCACTTGGACTTGCAGAAGATCCTAAAAGCTTGAGGTGGTATGTGCAAGCAGAGCTGGTTCATGCTCGCTTTGCAATGCTCGGGGTCTTCGGAATTCTAGTCACAGATCTACTTCGCGTCACAGGACTTAGTAAGATACCAGTTTGGTATGAAGCCGGTGCAGCAAAGTACGAGTTTGCTAACACAGGGACACTCATCATTGTTCAACTACTTCTGATGGGGTTTGCTGAAACAAAAAGATACATGGATTTTGTTAGTCCTGGATCTCAAGCTAAAGACGGGTCCTTCTTTGGATTAGAAGCTTCACTAGAAGGCTTAGAGCCAGGGTACCCTGGGGGGCCTCTGCTAAATCCTCTTGGCATAGCTAAAGACATAAAAAATGCTCATGACTGGAAGCTTAAAGAGATTAAGAACGGGCGACTTGCAATGGTGGCAATTTTTGGCATCTTTGTACAAGCTTCAGTAACTCATGTTGGGCCAATTGATAACCTTGTGGAGCATCTTTCCAATCCATGGCATAAAACTATTATTCAGACACTTGCTACTTCTACTTCTTAG 891 0.4512 MCGCNESGISLALGLWSSITTRADNQETMAVAIGRSFTFQPCSLFNNKGVDKTSPLGRHPWLGSDAAAARAGVTQHKRRISVAAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLAEDPKSLRWYVQAELVHARFAMLGVFGILVTDLLRVTGLSKIPVWYEAGAAKYEFANTGTLIIVQLLLMGFAETKRYMDFVSPGSQAKDGSFFGLEASLEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAIFGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLATSTS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0202 296 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 5, CHLOROPLASTIC 29 293 - -
Lal21g0202 296 Pfam Chlorophyll A-B binding protein 96 264 IPR022796 -
Lal21g0202 296 Gene3D Chlorophyll a/b binding protein domain 89 296 - -
Lal21g0202 296 SUPERFAMILY Chlorophyll a-b binding protein 80 292 - -
Lal21g0202 296 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 29 293 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0202 Lal-Chr21 1327128 1331114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0202 79 291 Chloroplast and Mitochondria Gene Families AT3G61470 47.196 3.30e-61 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0202 K08911 - gmx:100804934 430.639