Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0182 ATGGAAGCAATGAACAGAAGCTCATCCAACGCTACCTCTTCCTCAGACTCTTCCTCTTCAGAATCCAACCAACCTAGAAACCCAAACAAGCCTCAAAGAATCAAAGGTCCATGGAGTGCTGAAGAAGACCGTATCCTCACCCAACTCGTGGAACGATACGGCCCAAGAAACTGGTCTTTAATTAGTCGCTACATAAAAGGAAGGTCCGGCAAGTCATGCAGGCTACGGTGGTGCAACCAGCTTAGCCCCGCCGTGGAACACCGTCCCTTCTCCGTCCAAGAGGACGAAACTATCATAGCCGCACATGACCAGTACGGTAACAGGTGGGCCACCATTGCTCGTTTATTACCTGGTCGAACCGATAATGCAGTGAAGAACCATTGGAATTCAACGTTGAAACGAAGAGTCAGGGATCAACAACGTAGCTCATTTGTTCCTACAACTACTACTACTACTACTTTCGGAGAGAGAGGAACTTCTTTATCGGAGGATCCAATGACCGCGTTGACTCTTGCTCCGCCGGGTATTGATAATGGTGGTGCTGCCGAGAAGGGGAGGCCGTCGCCGGAGGAGGATGTGCCGTCGGGGTTTTGGAATATGATGAGAGATGTTATTGCTAGAGAAGTTAGAGAATACGTGTCTTCTAATTTTGCTGATAATAATTCACGTTTTCATTGA 678 0.4808 MEAMNRSSSNATSSSDSSSSESNQPRNPNKPQRIKGPWSAEEDRILTQLVERYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPAVEHRPFSVQEDETIIAAHDQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRDQQRSSFVPTTTTTTTFGERGTSLSEDPMTALTLAPPGIDNGGAAEKGRPSPEEDVPSGFWNMMRDVIAREVREYVSSNFADNNSRFH 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0182 225 MobiDBLite consensus disorder prediction 1 40 - -
Lal21g0182 225 CDD SANT 89 132 IPR001005 -
Lal21g0182 225 Gene3D - 88 153 - -
Lal21g0182 225 MobiDBLite consensus disorder prediction 1 30 - -
Lal21g0182 225 ProSiteProfiles Myb-like domain profile. 30 81 IPR001005 -
Lal21g0182 225 Pfam Myb-like DNA-binding domain 38 96 - -
Lal21g0182 225 SUPERFAMILY Homeodomain-like 32 128 IPR009057 -
Lal21g0182 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 136 IPR017930 -
Lal21g0182 225 ProSiteProfiles Myb-like domain profile. 82 132 IPR001005 -
Lal21g0182 225 Gene3D - 34 86 - -
Lal21g0182 225 SMART sant 34 83 IPR001005 -
Lal21g0182 225 SMART sant 86 134 IPR001005 -
Lal21g0182 225 MobiDBLite consensus disorder prediction 141 166 - -
Lal21g0182 225 PANTHER MYB PROTEIN-RELATED 1 209 - -
Lal21g0182 225 MobiDBLite consensus disorder prediction 139 195 - -
Lal21g0182 225 CDD SANT 37 79 IPR001005 -
Lal21g0182 225 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 1 209 - -
Lal21g0182 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 85 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0182 Lal-Chr21 1183934 1184611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0182 33 153 MYB Transcription Factor Family AT3G50060 71.074 4.85e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal21g0182 Myb_DNA-bind_6 3.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0182 - - lang:109327990 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0182 21 1183934 1184611 Lal21g0182 21 1183934 1184611 ECH
Lal17g0096 17 600397 601074 Lal21g0182 21 1183934 1184611 LSH
Lal21g0182 21 1183934 1184611 Lal4g0114 4 700521 701237 LSH