Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0170 ATGCAGGCCTTAGGCTGCTCTCTTGTTCTTTCCTTAATCATCTTCTCATCATTCTCATCCTTCTCCTTTGCACTTTCCAACGATGAAGCCGCTTTCATCGCTCGCCGCCAATTGTTACATCTTCATGAGAATGAGGAATTAACAGAGTCATATGTAGTAAGCTATAAAACAGATCTAAAATTTGATAACCCAAGACTAAAAAATGCATACATTGCATTTGAGGCTTGGAAAAAAGCAATGTATTCTGACCCATCAAACTTCACATCCAATTGGGTAGGACCAGATGTTTGCTCCTACAAAGGAGTTTTTTGTGCACCTGCCCTTGATGATCCCGAAATCGAAGTTGTGGCTGGGGTTGATCTTAACCATGCAGACATTGCTGGTTACATTCCTCCTGAGCTTGGTTTGTTAAGTGATCTTGCTCTTTTTCATATCAACTCAAACAGGTTCTGTGGTGTTCTTCCCAAGAGTTTATGTAATCTAAAACTTATGCATGAGCTTGATGTTAGTAACAACCGTTTTGTTGGTCCATTCCCTGAATCTGTTATTTGCCTTCAAGATATCAAATATCTTGACCTGAGGTTCAATGACTTTGAAGGGGAAGTACCTTTTGAGCTATTCAACAAGACACTTGATGCTATCTTTTTGAACAACAATAGATTTGTGTCGACAATTCCAGAGAACCTAGGGAACTCACCAGCTTCAGTTATTGTTTTGGCCAATAACCATTTCAATGGTTGCATTCCTGGAAGCATTGGTCAAATGGACAAAACTCTTAATGAGTTTGTGGTTGTCAACAACAACCTCTCTGGATGCTTGCCTGTTGAAATTGGAAAGCTTTCGAACGTCGAGGTGTTTGATGTGAGCCAGAACATGCTTGTTGGTGCATTGCCAAATACCTTAAACGGGCTCGGAAAGGTGGAAGAGTTATCCATTGCAAATAACAAGCTCACGGGTAATGTACCATATAGCATATGTAGCTTGCCTGGTTTGGTGAACTTCACGTTTTCGGGTAACTATTTCAATGAAGAGGAAAAAGATTGTGTACCTGAATCTAGAAAGGATATTGAGTTGAATGATGAGAGAAACTGCATTCCTAATAGGCCAAAACAGAGGGGTTCAAGTGAATGTAATGCAGTCATAAGCAAGCCTGTTGATTGCAGCAAGACTCAATGTGGTCACCAATCTCATTCCAATAATCCTCCAAGTGAAACTCCATCTCAACCGGAACCAAAATTTACCCCTTCTATCTCTAATCCTCCAACCCAAACTCCCTCAAAACCAAAATCACCATCAGAGACACCAGAAACTCCCAAAACAAAACCACCTACACCAGAAACACCAAAAACACCAAAAACACAACCACCAGAAACACCTAAGCCAGAACCTCCAACCACACCAGAAACACCAAAAGTGCAACCACCTGCCACACCACAAACACCCAATCTAGAACCTCCACCTACACCAGAAACACCAGAAGGACAACCACCTACCACACCACAAACCCCCAAGCCAGAACCACCACCAACACCCAAAGCAGAACCACCACCGACCCCCAAAGCAGAACCACCACCCACACAACAAACAACAAAACCACAACCACCAGAAACACCTAAATCACCACCACTTGAGGATGATTCTCATAAAGAAGCACCCCGTGAACGATCTAGGACTCCACCACCACCAATCCAATCTCCACCACCCCCAATCCAATCACCTCCACCACCAGTCCATTCTCCACCACCTCCAATGCAGTCACCACCTCCAATGCAGTCACCACCTCCATCACCAGTCCATTCTCCACCACCTCCAATGCAGTCACCACCACCACCACCAGTCCATTCTCCTCCACCCCCAGTCCAATCACCTCCACCACCAGTCCATTCTCCTCCACCCCCAATCCAATCACCTCCACCACCAGTCAATTCTCCTCCACCCCCTACCCAGTCACCTCCACCACCAGTCCACTCTCCTCCACCCCCTACCCAGTCACCTCCACCACCAGTCCACTCTCCTCCACCACCTGCCCACTCTCCTCCACCACCAGTCCATTCTCCTCCACCACCTGCCCACTCTCCTCCACCACCAGTCCATTCTCCTCCACCCCCCGCCCAGTCACCTCCACCACCAGTCCACTCTCCTCCACCACCAGTCCATTCTCCACCACCACCAGTCCAGTCACCACCACCACCAGTCCATTCTCCTCCTCCACCAATTCATTCTCCTCCTCCACCAGTTCGTTATCCTCCCCCACCAATCCGTTATCCCCCACCACCTGTACCAGTTAACTCACCACCACCACCAGTACACTCTCCACCACCACCTACACCAACTATTTCACCTCCTCCTCCTCCAGAAGAAGAAGAAGAAGACATCATTCTTCCACCTCACTTTGGCTCTTCATATGCTTCACCTCCTCCGCCAATCATTGCTGGCTACTAA 2442 0.4705 MQALGCSLVLSLIIFSSFSSFSFALSNDEAAFIARRQLLHLHENEELTESYVVSYKTDLKFDNPRLKNAYIAFEAWKKAMYSDPSNFTSNWVGPDVCSYKGVFCAPALDDPEIEVVAGVDLNHADIAGYIPPELGLLSDLALFHINSNRFCGVLPKSLCNLKLMHELDVSNNRFVGPFPESVICLQDIKYLDLRFNDFEGEVPFELFNKTLDAIFLNNNRFVSTIPENLGNSPASVIVLANNHFNGCIPGSIGQMDKTLNEFVVVNNNLSGCLPVEIGKLSNVEVFDVSQNMLVGALPNTLNGLGKVEELSIANNKLTGNVPYSICSLPGLVNFTFSGNYFNEEEKDCVPESRKDIELNDERNCIPNRPKQRGSSECNAVISKPVDCSKTQCGHQSHSNNPPSETPSQPEPKFTPSISNPPTQTPSKPKSPSETPETPKTKPPTPETPKTPKTQPPETPKPEPPTTPETPKVQPPATPQTPNLEPPPTPETPEGQPPTTPQTPKPEPPPTPKAEPPPTPKAEPPPTQQTTKPQPPETPKSPPLEDDSHKEAPRERSRTPPPPIQSPPPPIQSPPPPVHSPPPPMQSPPPMQSPPPSPVHSPPPPMQSPPPPPVHSPPPPVQSPPPPVHSPPPPIQSPPPPVNSPPPPTQSPPPPVHSPPPPTQSPPPPVHSPPPPAHSPPPPVHSPPPPAHSPPPPVHSPPPPAQSPPPPVHSPPPPVHSPPPPVQSPPPPVHSPPPPIHSPPPPVRYPPPPIRYPPPPVPVNSPPPPVHSPPPPTPTISPPPPPEEEEEDIILPPHFGSSYASPPPPIIAGY 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0170 813 SUPERFAMILY L domain-like 77 343 - -
Lal21g0170 813 Gene3D Ribonuclease Inhibitor 71 368 IPR032675 -
Lal21g0170 813 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 714 810 - -
Lal21g0170 813 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 609 675 - -
Lal21g0170 813 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 4 619 - -
Lal21g0170 813 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 664 731 - -
Lal21g0170 813 MobiDBLite consensus disorder prediction 387 813 - -
Lal21g0170 813 MobiDBLite consensus disorder prediction 557 783 - -
Lal21g0170 813 MobiDBLite consensus disorder prediction 404 540 - -
Lal21g0170 813 MobiDBLite consensus disorder prediction 387 403 - -
Lal21g0170 813 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 4 619 - -
Lal21g0170 813 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 714 810 - -
Lal21g0170 813 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 609 675 - -
Lal21g0170 813 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 664 731 - -
Lal21g0170 813 MobiDBLite consensus disorder prediction 541 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0170 Lal-Chr21 1130486 1132927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0170 4 539 Trihelix Transcription Factor Family AT3G19020 54.741 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0170 - - gmx:100780677 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0093 17 581872 583722 Lal21g0170 21 1130486 1132927 LSH
Lal21g0170 21 1130486 1132927 Lal4g0111 4 686385 688919 LSH