Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0164 ATGATCAATAAACAACAACCACTGCTCCTTTTACTTTTCATCTTCCCAATAATCACATCCCAAGTTAACTACTGCGCGTGCAACCAAACATGCGGTTCCGCAAAACCATTCTCTTACCCTTTTGGCTTCTCCTCCGGCTGCCAAATCCGCCTCAACTGCACCCCGCACGGTGAAATCTTCATCGGTGAATTCCCGGTTCAATCTGTAAACACAGAAAGCATAATCGTCAACATCAAAGGTAAATGCAATCGTCCAATTGATACCTTCCACCAATTATTCAGTCACAAATATGCACCCACTTCAGGGAATGTTATATTGTTAAAGAATTGCACTAAAAAGATGTCGCTGTGTTCGATAACGGAGACATTGGTGGAGTCTCATATTGAATCCGACGGTTGTAACGGCGATAGGAGCGGGAACTTGAGTTGCTACTTTGAAAACAGCACGAAGGGTTTTATGAGTGATCATAAATTGGAGAGACTCGGGTGTGAGTACTTCATGTCTTCGATAGCGACTGAGGATTTGAGGAATAATTCCGGTACGGCGGTGTCGTTAGAGGTAGCAACGATAGAGCTTGGATGGTGGCTTCAGGGAAGTTGTGAATGTTCCGGTGATGCCAATTGTACAGAAATTTTGTCCCCGGTGGATGGAAAGGTCGGATTCCGATGTCTATGCAAACAAGGGTTCATCGGTGATGGTTTTTTGGCCGGAAATGGCTGCCGGAAAGCATTTGTTTTTGGAGCTTCACTGATGATTACTGTGGGTTCACTATGTTTTTTATTTCGGCGGCGAAGGAAATTGAGAGTTACAAAGAGCACAAAAAGGCGCATAACGGAAGCTACTGGAAATTACAGTGTTCCTATGTATCCATACAAAGACATTGAAAAAGCCACAAATAGCTTCTCAGAGAAACAACAGCTTGGAAATGGAGCATATGGGACAGTTTATGCAGGAAAGCTTTACAATGATGAATGGGTTGCAATCAAGAGAATTAAGCATAGAGACACTGATAGTATTGAGCAAGTAATGAATGAGATCAAGCTTCTTTCCTCAGTTAGCCACACCAATTTAGTCCGATTGTTGGGTTGTTCCATAGAATATGGTGAACAAATCCTTGTGTATGAGTTCATGCCCAATGGAACTTTAAGTCAACATTTGCAAAGAGAAAGAGGGAATGGTCTTCCATGGCCAGTTAGGGTTACAATTGCAGCAGAAACAGCACAAGCAATAGCACATCTTCATTCCACTATTAATCCCCCTATTTACCATAGAGATATAAAATCAAGTAACATACTTTTGGACTATAATTTCAGATCCAAAGTAGCAGATTTTGGTCTCTCTAGACTTGGAATGACTGAAACATCCCATATTTCAACTGCCCCACAAGGAACCCCTGGCTATGTTGATCCACAATACCATCAAGATTTTCAACTTTCTGATAAAAGTGATGTGTATAGCTTTGGTGTTGTTCTTGTTGAGATTATAACAGGAATGAAAGTAGTGGACTTTTCTCGTCCTCATAATGAAGTTAACTTAGCTTCTCTTGCTGCAGATAGGATTGGGAGAGGGTTATTGGATGAGATTATAGATCCATTTCTTGAGCCTGAAGTAAGTAATGATGCTTGGACCTTTTCTTCTATACACAAGATTGCTGAGTTAGCATTTAGATGCCTTGCATTTCATAGGGATATGAGGCCTTCTATGACAGAAGTGGCAACTGAGCTAGAGCATCTCAAGCTTAGTAGTAACTGGACAAGTTTTGGAGATAACAATGTTACAACTTCAACAGAGTTGTCCTCTTGTTCTACTTCCTCTTATCAAAGTGAGAAACCACTAAAAATTATCATGGAGAAGAAGATTGAGCCAGAGGGTAAAGCTAAAGCTTATCTCAGATTAAAAACTGGGTCAGTTGCATTAAGCTCATTGGAAAGGACCAATAGTGCATCACCTGTTTCAGTGCAAGATCCAGAAATATGGTTGAGTGAACAAAGCTCTCCTTCATCATATAGTTTTCCTAGAAAGTCATTTAATTGA 2034 0.4076 MINKQQPLLLLLFIFPIITSQVNYCACNQTCGSAKPFSYPFGFSSGCQIRLNCTPHGEIFIGEFPVQSVNTESIIVNIKGKCNRPIDTFHQLFSHKYAPTSGNVILLKNCTKKMSLCSITETLVESHIESDGCNGDRSGNLSCYFENSTKGFMSDHKLERLGCEYFMSSIATEDLRNNSGTAVSLEVATIELGWWLQGSCECSGDANCTEILSPVDGKVGFRCLCKQGFIGDGFLAGNGCRKAFVFGASLMITVGSLCFLFRRRRKLRVTKSTKRRITEATGNYSVPMYPYKDIEKATNSFSEKQQLGNGAYGTVYAGKLYNDEWVAIKRIKHRDTDSIEQVMNEIKLLSSVSHTNLVRLLGCSIEYGEQILVYEFMPNGTLSQHLQRERGNGLPWPVRVTIAAETAQAIAHLHSTINPPIYHRDIKSSNILLDYNFRSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQDFQLSDKSDVYSFGVVLVEIITGMKVVDFSRPHNEVNLASLAADRIGRGLLDEIIDPFLEPEVSNDAWTFSSIHKIAELAFRCLAFHRDMRPSMTEVATELEHLKLSSNWTSFGDNNVTTSTELSSCSTSSYQSEKPLKIIMEKKIEPEGKAKAYLRLKTGSVALSSLERTNSASPVSVQDPEIWLSEQSSPSSYSFPRKSFN 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0164 677 Gene3D Transferase(Phosphotransferase) domain 1 377 597 - -
Lal21g0164 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Lal21g0164 677 SMART serkin_6 301 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0164 677 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 619 IPR045274 GO:0007166
Lal21g0164 677 SUPERFAMILY Protein kinase-like (PK-like) 277 576 IPR011009 -
Lal21g0164 677 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Lal21g0164 677 Pfam Protein kinase domain 301 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0164 677 ProSiteProfiles Protein kinase domain profile. 301 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0164 677 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 21 619 - -
Lal21g0164 677 Gene3D Phosphorylase Kinase; domain 1 262 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0164 Lal-Chr21 1105081 1110527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0164 9 668 Receptor kinase-like Gene Family AT2G23450 52.143 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lal21g0164 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0164 - - gmx:100777480 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0164 21 1105081 1110527 Lal21g0164 21 1105081 1110527 ECH
Lal17g0580 17 4128231 4132822 Lal21g0164 21 1105081 1110527 LSH