LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal21g0163	ATGGCTTCATTTACGTCTGTATCTTCCCAATCACTCAATAATGCATCAACACTATCTTCACCATTCTTATTATCAATTCACATTCCCCTTAACCCAAAAATTGCTTCATTTTCCTCTGTTTCTTCCCATTTCCGCCAACTAGAATTCCCATCAACTAAAAAACCTTCTAACCGTTCTTCCACATGCACATTCAGATCAACCCCATCAATCAAAGCCACAGTCTCTGAAACGTCGTCGCTTTCATCAGTTCCACCAACACCAGCACCCACCCAACTTCCGTTACGTGATATCCCTGGAGATTATGGATTCCCTATTGTGGGACCCATCAAAGACCGTCTCGACTATTTCTACGATCAAGGTCGTGACACTTTCTTCAGGTCTCGTGTCCAAAAATATAAATCAACCGTTTTCCGCGCCAACATGCCACCAGGTCCTTTCATTGCTTCTAATTCTAACGTTATCATTTTACTCGACGGTAAAAGCTTCCCCATCCTCTTCGATGTTACCAAAGTAGAAAAAAAAGACTTATTTACCGGTACTTTTATGCCTTCTACTGATCTCACTGGCGGTTACAGAATCCTCTCATACCTCGACCCTTCTGAACCAAAACACGAGAAACTCAAACAATTAGTATTCTTTCACCTCAGATCTCGAAGCAACAACGTCATTCCAGAGTTTCATTCAACCTACACAAACCTCTTCGATTCTCTTGAAAAAGAACTCGCAGCTAAAGGAAAAGTGGACTTCGGAGGTGCACATGATCAAACCGCGTTTAACTTCCTAGCTCAATCTCTTTATGGTACAAACCCTAAAGACACGAAACTAGGAAGTGACGGACCAACAATAATAACCAAATGGGTTTTGTTCCAACTCAGTCCTATTTTAACGTTGGGACTTCCGAAGCTTCTAGAAGACCCCATTCTTCATACCTTCCGTCTCCCTCCATCACTCGTAAAGAGTGATTATCAGAGACTCTACGATTTCTTTTACGAATCGTCAGGGTTTGTTTTTGAAGAAGCTCAGCGTTTAGGTATCGCAAAAGAAGAAGCGTGTCACAATATCTTATTCGCCACGTGTTTTAATACATTTGGTGGAATGAAAATCTTTTTTCCCAACGTGCTTAAATGGATTGGAAGTGCAGGGGTTAAACTTCACACTCAGTTAGCAGAGGAGATAAGATCCGTCGTCAAATCTAACGGCGGTAAAATAACGATGGGTGTAACGGAACAAATGCCGTTGATGAAATCAGTGGTATACGAATCGTTCCGTATTGATCCACCAGTTCCGTTACAGTACGCAAAAGCGAAACAGGATTTAGTGATAGAGAACCATGAGAACACGTTTAAAGTGAAGAAAGGGGAAATGTTGTTTGGGTTTCAACCTTTTGCGACAAAAGATCCTAAGATTTTTGAGAAGGCTGAAGAGTTTGTTGGGGACAGGTTTGTGGGTGAAGGAGAGAAGTTGTTGAAACATGTGCTTTGGTCTAATGGACCTGAAACTGAAAGCCCCTCTGTTAATAACAAGCAATGTGCTGGCAAGGATTTTGTGGTCTTCATTTCTAGGCTTTTTGTCATTGAGTGGTTTCTTCGTTATGATTCGTTTAAGGTACAAGTAGGAAAGTTACCATTGGGCTCTTCTATTACCATCACCTCTCTTAAGAAGGCAACATCTTAA	1674	0.414	MASFTSVSSQSLNNASTLSSPFLLSIHIPLNPKIASFSSVSSHFRQLEFPSTKKPSNRSSTCTFRSTPSIKATVSETSSLSSVPPTPAPTQLPLRDIPGDYGFPIVGPIKDRLDYFYDQGRDTFFRSRVQKYKSTVFRANMPPGPFIASNSNVIILLDGKSFPILFDVTKVEKKDLFTGTFMPSTDLTGGYRILSYLDPSEPKHEKLKQLVFFHLRSRSNNVIPEFHSTYTNLFDSLEKELAAKGKVDFGGAHDQTAFNFLAQSLYGTNPKDTKLGSDGPTIITKWVLFQLSPILTLGLPKLLEDPILHTFRLPPSLVKSDYQRLYDFFYESSGFVFEEAQRLGIAKEEACHNILFATCFNTFGGMKIFFPNVLKWIGSAGVKLHTQLAEEIRSVVKSNGGKITMGVTEQMPLMKSVVYESFRIDPPVPLQYAKAKQDLVIENHENTFKVKKGEMLFGFQPFATKDPKIFEKAEEFVGDRFVGEGEKLLKHVLWSNGPETESPSVNNKQCAGKDFVVFISRLFVIEWFLRYDSFKVQVGKLPLGSSITITSLKKATS	557

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal21g0163	557	PANTHER	CYTOCHROME P450 26	74	555	-	-
	Lal21g0163	557	Pfam	Cytochrome P450	386	485	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lal21g0163	557	Gene3D	Cytochrome P450	92	557	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lal21g0163	557	PANTHER	ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE	74	555	-	-
	Lal21g0163	557	PRINTS	E-class P450 group IV signature	411	427	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lal21g0163	557	PRINTS	E-class P450 group IV signature	464	482	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lal21g0163	557	PRINTS	E-class P450 group IV signature	510	528	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lal21g0163	557	SUPERFAMILY	Cytochrome P450	92	540	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal21g0163	Lal-Chr21	1102116	1103789	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal21g0163	49	556	Cytochrome P450	AT5G42650	66.732	0.0	700

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal21g0163	K01723		-	gmx:100807192	783.867

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal21g0163	21	1102116	1103789	Lal21g0163	21	1102116	1103789	ECH