Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0143 ATGGAACATAACAATCTCCATCACCTCCAACAAGACCAACCTCCACCTCTTGAGCCTTCTTCTTTGACCCCATCTTCCTATGGATCACTTGGTGGTAGGAGCCATTCTTGGACCCCAAATATTACTTTGAATGCTGGTAACTTCAACCAAAACCTGCAAGAAGCTAACCCCAGATCAAGAGCTTTAATGCACAAGAATGGTATGATACAAGATTCAGGTTATCATCATCACTGGACCAGTGATGCAGAAAGCTGCTTAGCCCCCACATTCAGTGAAATGCTAAACAGTACTCCTTCCAACATGGAAGACTATAAATATCATAATCCAATTCATTCTACTTCTACAGCGATCAACCAGATGAAAAATAGTAATGAGTGCAAAGATATGAATGCACTGAATGAGAAGTTGTTGCTGAAGACAATATTTTCAGGAGGCATGTACTCAACTAGTGCTGAGAATTATGGTAACTTTGGCGCCACTCATCATGGGGTACCAAGTATAGGGAACTTTAGCCAGATTTATCCAAGTATAAATATCTCAAACTTGAACCACTCATCAACTTCTACACCAATTTCAAGCTCCTTGAATAATATGGGCACTTCACAGCCCTTAGATCTGTTAACCTCACCAACATCATTCCCTGTGGGTTTGAGTCATCGTTCACATTCACAAGATCATGGTTTTTGTAATGATAATCTTTCTTTTCGTCTACATCAACCCACTGACAGGTCCTCATGTAATAACTCTGGTAATCTATCACACTTGAGCAATGGCGAGGTGGAAACAAAGAGACCCTGCACTTTGATGGAGTCAAAGACTACTCAATTTCAAACTGTATCGAAGAAATCACGATTGGAATCACGCCCATCATGTCCACTTATTAAGGTTAAGAAAGAGAAGTTGGGAGATAGGATTGCGGCTCTTCAGCAGTTGGTGGCTCCTTTTGGCAAGACAGATACAGCATCTGTTCTTATGGAGGCTATTGGATATATTAAATTCCTTCAAGGCCAAGTTGAGACACTGAGTGTTCCATACATGAAGTCATCTCAGAACCAGAACAACAGAGTCATGCAAAGGGGTTCAGCCATAGGAGACACACATGGAGAACAAAATCAAGATCTTAGAAGCCGAGGTCTCTGTCTTGTGCCATTGTCTTGCATGTCATACATAGCAACTGATGGTGGCACTGAGGTGTGGCAGCAACCTAACTTTGGTGGAGCAACTTAG 1227 0.4181 MEHNNLHHLQQDQPPPLEPSSLTPSSYGSLGGRSHSWTPNITLNAGNFNQNLQEANPRSRALMHKNGMIQDSGYHHHWTSDAESCLAPTFSEMLNSTPSNMEDYKYHNPIHSTSTAINQMKNSNECKDMNALNEKLLLKTIFSGGMYSTSAENYGNFGATHHGVPSIGNFSQIYPSINISNLNHSSTSTPISSSLNNMGTSQPLDLLTSPTSFPVGLSHRSHSQDHGFCNDNLSFRLHQPTDRSSCNNSGNLSHLSNGEVETKRPCTLMESKTTQFQTVSKKSRLESRPSCPLIKVKKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQGQVETLSVPYMKSSQNQNNRVMQRGSAIGDTHGEQNQDLRSRGLCLVPLSCMSYIATDGGTEVWQQPNFGGAT 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0143 408 CDD bHLH_AtbHLH_like 295 342 IPR045239 -
Lal21g0143 408 MobiDBLite consensus disorder prediction 8 34 - -
Lal21g0143 408 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 109 393 - -
Lal21g0143 408 PANTHER OS01G0105700 PROTEIN 109 393 - -
Lal21g0143 408 Gene3D - 295 362 IPR036638 GO:0046983
Lal21g0143 408 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 285 334 IPR011598 GO:0046983
Lal21g0143 408 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 295 348 IPR036638 GO:0046983
Lal21g0143 408 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0143 Lal-Chr21 991002 995484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0143 24 408 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 36.913 5.10e-55 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0143 - - lang:109326222 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0143 21 991002 995484 Lal21g0143 21 991002 995484 ECH