Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0132 ATGGCTGATTCAGCCTCTTCCAGGAGAATGTGGTGCTCCTTCCCTGAAAAATTTCAGCTGCATGGAGCCATGTTGGCCTTGCAGTTTGGCTATGCTGGCTTCCATGTTGTCTCAAGAGCTGCCCTTAACATGGGCGTTAGCAAACTTGTTTTCCCTGTCTACCGGAATATTATTGCTTTTCTTCTTCTCGTTCCTTTTGCATACTTCTTGGAAAAGAAGGAGAGGCCTCCACTCACTTTAAACTTAGCCCTTCAGTTCTTTCTCCTGGCACTTGTCGGGATCACAGCCAACCAAGGTTTCTACTTGCTTGGCTTGGACAACACATCCCCAACATTCGCATCAGCAATACAGAACTCTGTCCCAGCCATTACATTTCTCATGGCAGCCATACTCAGGCAACCCCTTAATTTATTATTTCTCAGGATAGAGAAAGTGAGGGTGGACAGAAAGGACGGAATAGCAAAGGTGGCAGGAACTGTATTCTGTGTTGCAGGAGCAACTGTGATTACACTATACAAGGGTCCAACTATCTACAGCCCAGTTGCACCATTACACAACAGCATCATCAACACTACACCACAAGTAGTGTTTGGGTCAGTGTCACTGGGAGATGCAGAAGGAAAGAATTGGACCCTAGGTTGTCTCTACCTCATAGGTCATTGCTTGTCTTGGTCTGGTTGGCTCGTTTTACAAGCACCCCTTCTCAAGAAATATCCTGCTCGCCTATCTGTCACTTCCTATACTTGTTTCTTTGGACTCTTGCAGTTTCTTGTTATTGCTTTGGTTGTTGAAAGGAATGCAAGTGCTTGGGTTTTCCAATCTGGTGGAGAAGTTTTCACTATTTTATATGCGGGAGTGGTAGCATCTGGAATAGCCTTTGCTGTACAAATATGGTGCATTGATAGAGGTGGCCCTGTGTTCGTTGCTGTGTATCAACCTGTTCAAACTCTTGTTGTTGCTATTATGGCTTCCCTTGCTTTAGGCGAAGAATTCTACTTGGGCGGGATCATTGGGGCAGTATTGATCATAGTGGGGTTATACCTAGTCTTGTGGGGTAAAAATGAAGAAAAGAAGTTTGCAAAGGAACAGGCTGCAATTACTTCCACTTCTAATGCCAGAATATCAATTACTCAACCTCTTCTCCCTTCATCAACAGAAAATGTATGA 1167 0.4439 MADSASSRRMWCSFPEKFQLHGAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIAFLLLVPFAYFLEKKERPPLTLNLALQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAILRQPLNLLFLRIEKVRVDRKDGIAKVAGTVFCVAGATVITLYKGPTIYSPVAPLHNSIINTTPQVVFGSVSLGDAEGKNWTLGCLYLIGHCLSWSGWLVLQAPLLKKYPARLSVTSYTCFFGLLQFLVIALVVERNASAWVFQSGGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASLALGEEFYLGGIIGAVLIIVGLYLVLWGKNEEKKFAKEQAAITSTSNARISITQPLLPSSTENV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0132 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 355 - -
Lal21g0132 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 138 - -
Lal21g0132 388 Pfam EamA-like transporter family 25 137 IPR000620 GO:0016020|GO:0016021
Lal21g0132 388 Pfam EamA-like transporter family 212 350 IPR000620 GO:0016020|GO:0016021
Lal21g0132 388 PANTHER WAT1-RELATED PROTEIN 13 375 IPR030184 GO:0016021|GO:0022857
Lal21g0132 388 PANTHER WAT1-RELATED PROTEIN 13 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0132 Lal-Chr21 926979 929881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0132 1 388 Nodulin-like Gene Family AT1G75500 72.070 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0132 - - gmx:100786714 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0132 21 926979 929881 Lal21g0132 21 926979 929881 ECH
Lal8g0557 8 3864664 3868940 Lal21g0132 21 926979 929881 PCT
Lal25g0540 25 3937119 3940647 Lal21g0132 21 926979 929881 PCT
Lal10g0868 10 16185446 16189089 Lal21g0132 21 926979 929881 PCT
Lal21g0132 21 926979 929881 Lal8g0557 8 3864664 3868940 PCT
Lal21g0132 21 926979 929881 Lal25g0540 25 3937119 3940647 PCT
Lal21g0132 21 926979 929881 Lal10g0868 10 16185446 16189089 PCT