Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0124 ATGGACGATCCAGGCCATCGTGAAAATGGAAGGCACAAACCGGATCAATATAAATCTCCTCAAGGACAGTGGTTGATGCAACATCAGCCTTCCATGAAGCAGATTATGGCACTTATGGCAGAAAGAGATGCAGCCATTCAGGAAAGAAATCTGGCAGTTTCTGAGAAAAAGGCAGCACTTGCAGAGCGTGACATGGCATTCCTGCAGCGAGATACGGCACTTGCAGAACGAAATAATGCAATTATGGAAAGAGATAATGCAATTGCAGCTCTTCAGTATCGAGAGAACTCCTTAACCACTGGTAGTATGTCAGCATGTCCTCCAGGATGCCAAATCTCACGTGGTGTCAAGCATATGCATCATCCTCAGCAACAGGTACACCACTTACATAACATGAGCGATGCTTCTTACGGCACACAGGAAATGACCACAACAGATGCCCTCCCAGAAGCACCCATCCCTTCAGAGGCTGGTAAATCAAGGCGTGCCAAACGACCAAAGGAAGCTAAGTCAATTTCACCTAATAAGAAGGCTTCAAAAAGAAAAGTCAAAATGGAGAGTGAAGACTTAAACGGCATGATGTTTGGCAAGACACCTGAGTGGAAGAGTAGTCAGGAACTGTTTAACGGAGGCGATGATCTTAACAAGCAGTCAGTGGTGTCAAAGGCTGATTGGAAAGGCCAGGACTTGGGTCTGAATCAAGTGGCATATGATGAGTCTACCATGCCAGCGCCCGTTTGCTCTTGTACTGGTGCTCTGAGGCAGTGCTACAAATGGGGTAATGGGGGTTGGCAGTCTGCTTGTTGCACAACAACACTGTCAATGTATCCACTTCCAGCAGTGCCCAACAAGAAGCATGCCCGGGTCGGTGGTCGGAAGATGAGTGGAAGCGCTTTCAATAAGCTGCTTAGTCGGCTTGCTGCAGAAGGTCATGATCTGTCAAACCCAGTTGACCTCAAGGACCATTGGGCCAAACATGGTACAAATCGATACATCACAATAAAGTAG 1008 0.4722 MDDPGHRENGRHKPDQYKSPQGQWLMQHQPSMKQIMALMAERDAAIQERNLAVSEKKAALAERDMAFLQRDTALAERNNAIMERDNAIAALQYRENSLTTGSMSACPPGCQISRGVKHMHHPQQQVHHLHNMSDASYGTQEMTTTDALPEAPIPSEAGKSRRAKRPKEAKSISPNKKASKRKVKMESEDLNGMMFGKTPEWKSSQELFNGGDDLNKQSVVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGALRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKKHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0124 335 MobiDBLite consensus disorder prediction 145 196 - -
Lal21g0124 335 MobiDBLite consensus disorder prediction 1 15 - -
Lal21g0124 335 Pfam GAGA binding protein-like family 1 335 IPR010409 -
Lal21g0124 335 MobiDBLite consensus disorder prediction 1 21 - -
Lal21g0124 335 PANTHER - 1 335 IPR010409 -
Lal21g0124 335 SMART GAGA_bind_2 1 335 IPR010409 -
Lal21g0124 335 PANTHER PROTEIN BASIC PENTACYSTEINE6 1 335 - -
Lal21g0124 335 Coils Coil 51 78 - -
Lal21g0124 335 MobiDBLite consensus disorder prediction 157 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0124 Lal-Chr21 849913 853241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0124 65 335 BBR or BPC Transcription factor family AT5G42520 65.278 1.37e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lal21g0124 GAGA_bind 4.7e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0124 - - gmx:100783502 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0124 21 849913 853241 Lal21g0124 21 849913 853241 ECH
Lal17g0066 17 385941 389213 Lal21g0124 21 849913 853241 LSH
Lal21g0124 21 849913 853241 Lal4g0078 4 462096 465423 LSH