Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0121 ATGCGTGGGTTGCAAAAATCAAAGCGAGTAACATGGGCCTCCGCTTTAAATCTTTGTCAGGTTAAGTTATTCTTATCAGAGGACTCTCCTTCACTAGTTGGGTTAAGTTCTCAGGATCACCTCCAAGCGAAGAGATCATTGCACTCGCATCATGACAGGGCAGGTTCTGATGACATGTTACCTCCTGGCTTTGAGGGAACTCATGCTTCAAGTCAGTTTGAGATAGATCTGTCCCAAATACCAGTGATTCGATGGATTAGTCCACCCAAGATTGTGCTGGATCACACATGGCTAGTGGTGGCTGGGGAAGAAAGCAAAGAGGTAGAGGATCAACATAAGAGGGAAATGAGAGTACTTGAAGCTATTTATCCCCGTCCATCCTCCATTCCTCCAAACCCTGCTATCGTAATGGATGTTGAAGATTCCCATGCCATTGATGATGGTCAAACTGCTTTGATACCAATTACGCCTCTTGAAGATGAAGATGCTGCATTTGATGCAGTATCTGATTCACAGTCTAGTGAGTTACCTCCTGGCATACCTAGAAACCCATTGGAGTTAACTGGTGGTGTAGATGTAGCTGCTGCATCTGTAGCTTTAACTAATATAATAAAGAGCAATCAGCATGGAAATTTGACTGAACATGAGGTGCTTAGTAGTATTCTCAACAACGCAGAAATGATTGAAACGTTGGTTCGCGATTATGGATCAACTAGTAACCTGCAATATGTACATAACCAAGGGTCATCTTTAGTAGCCTTTTCCCATCCACACACTCCTAGTAATCAAGGAGAAACCACTATACCTTCACATGGTCTTTCAGCTACTTCTTATCCTCCCTCAACTGGAGGCCAAGTGGGATCTGTTGCTACTCAATGGCTTCCTAGGCCATCAATGAGTTCAGTTACTGTTTCTCCTCCTATCGAAGCCCCGTCCGTAAAGGATGCGAACTACTATAAGAGCTTGATTCAACAACATGGAGGAGATAGACAAGAAACACTTCCATATTCCAGTAATCATCAGATTCATCAGCCAGTAAATAACCCAGACACAACACACATTTATAGATCAAGGGATTCGAAACCAAAGATAATGAAGCCATGCATCTTCTTTAATAGTTCTAGAGGATGTCGGAATGGAACTAATTGTGCATACCAACATGATGCAGCGTTGCAGCCACGAGGTGGTGCTGTGACAAGGATGCAAGGTTCGAAGAGAATGAAAATGGATAGTGAGATTAGCAATTAA 1248 0.4295 MRGLQKSKRVTWASALNLCQVKLFLSEDSPSLVGLSSQDHLQAKRSLHSHHDRAGSDDMLPPGFEGTHASSQFEIDLSQIPVIRWISPPKIVLDHTWLVVAGEESKEVEDQHKREMRVLEAIYPRPSSIPPNPAIVMDVEDSHAIDDGQTALIPITPLEDEDAAFDAVSDSQSSELPPGIPRNPLELTGGVDVAAASVALTNIIKSNQHGNLTEHEVLSSILNNAEMIETLVRDYGSTSNLQYVHNQGSSLVAFSHPHTPSNQGETTIPSHGLSATSYPPSTGGQVGSVATQWLPRPSMSSVTVSPPIEAPSVKDANYYKSLIQQHGGDRQETLPYSSNHQIHQPVNNPDTTHIYRSRDSKPKIMKPCIFFNSSRGCRNGTNCAYQHDAALQPRGGAVTRMQGSKRMKMDSEISN 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0121 415 MobiDBLite consensus disorder prediction 43 58 - -
Lal21g0121 415 ProSiteProfiles Zinc finger C3H1-type profile. 362 390 IPR000571 GO:0046872
Lal21g0121 415 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 1 411 - -
Lal21g0121 415 MobiDBLite consensus disorder prediction 395 415 - -
Lal21g0121 415 MobiDBLite consensus disorder prediction 43 65 - -
Lal21g0121 415 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0121 Lal-Chr21 831299 836110 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lal21g0121 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0121 - - cam:101501814 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0121 21 831299 836110 Lal21g0121 21 831299 836110 ECH