Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0120 ATGCTAATGAGGGTGGAGAGAATGGAGAATAAGAATAGGATGGCTTCTATGGAAGGAGGAGGAGTTGTTGGGGTTCAAACTTTAGCTGCAGATATAAAGCTGCTCAAAGAAATGAAGGAACAAAATGTGGTGGGTAAGAGTTTCAGTACGGAGCTATGGCATGCTTGTGCTGGGCCTCTTGTATCGTTGCCTCAGGTTGGAAGTCTAGCCTATTACTTCCCTCAGGGACATAGTGAACAGTTGGCAGCTTCCACTAGAAGGAGAGCAGCAACCTCACAGGTTCCGAATTATCCGAATCTTCCATCTCAGTTGCTTTGCCAAGTCCAAAATGTCACACTTCATGCAGACCAAGAAACAGATGAAATATATGCTCAAATGAGCCTCCAACCACTAAATTCAGAAAATGATGTCTTTCCTATATCAGAGTTTGGGGTGAAGCCAAGTAAACATCCCAGTGAGTTTTTCTGCAAAATTTTAACTGCTAGTGATACTAGCACACATGGTGGATTTTCGGTACCACGCCGGGCTGCAGAAAAACTCTTTCCTCTTCTGGATTACGCAATGCAACCACCAACCCAAGAACTTGTTGTCCAGGATTTACATAACAATACATGGAAGTTTCGACATATATACCGCGGTCAGCCAAAGAGACACCTTCTCACAACTGGATGGAGTTTGTTTGTAGGCGTAAAAAGGCTTAAAGCAGGTGATTCTGTTCTTTTTATCAGGGATGAGAAATCGCAGTTACTAGTTGGTATCAGGCGCGCTAATCGTCAACAGACTACATTGCCATCATCAGTCCTTTCCGCTGATAGTATGCACATTGGTGTCCTTGCTGCTGCAGCTCATGCTGCTGCTAATCGAAGTCCATTCACTATTTTCTACAATCCAAGAGCATGCCCTTCAGAATTTGTTATTCCACTGGCTAAATACAGAAAAGCTGTATATGGGACGCAGGTCTCAGTTGGTTTGAGATTTGGTATGATGTTTGAGACGGAGGAATCAAATAAGCGCAGATATATGGGAACAATAGTTGGCATCTGTGACTTGGATCCTTTAAGCTGGCCTGGTTCTAAGTGGCGAAATATTCAGGTGGAGTGGGATGAGCCAGGGTGTAGTGAAAAGCAGAAAAGAGTTAGTTCATGGGACATCGAGACTCCTGAAAATTTCTTCATATTTCCTTCTTTGACTTCAACTCTTAAACGACCATTGCAATCTGGATTGTTGGGTCCAGAAAATGACTGGAACTCTCTGGTAAGAAGACCTTTTATGCGTGTTCCTGCGAATGGAACTGCAGAGTTCTCGAGCACCATACCAAATTTGTACCAAGAACAAATGATGAAATTTCTTTTGAAGCCTCAACTTGTTAACAATACTGGAACCTGTTCATGGGCCCCTCAACAAGAATTTGCTGCTAAGAGAGGTCCATCAGAAGAGTTCATGTCCACACACCCAACAGATAACCAAAGAGTTATTGCAGATTCAGTGGGCATGCCAAAACAAAATCTACATTATTTTCAAACTGAACAAGACCAATCTAATGCCTTGAAACCTCTAGCCAAAGTTGACAATCCTTCATCTTCTGGAACTGTTACTGATTATGTAAAATTAGAACCTGAGTTGTTTAGTAATCATATGTTTAACTTTCCTTCCATGGAAGGCTGCAACAGCGAAAAAATGTCCACAAATTATGTTAATCCCGAAAGCCTTGCTGGCCAATTGGCATTCCTTAATCAAAACCAGAATCCAATAGGGGTTGATGTTCCCTCATCAGGTTCCGCTATCGTGGATAGCCTACTTCCTCAGCTAGATAGTGACGAATGGATGATGTATTCTTCTTGCCAAAACGGATTTACGGAACCTTTATCAACTTTGCAAGAACATTCTGCACTTCCCTCTCAAGCAGTTAATCTCCCCTTACCTTCAGTAAGCCAAGACATGTGTGATTCATATCTCAAAAATTCTAAGTTCTTAACTCATGCAGAAAAGCTAACATCCATTTCTCAGCAAGAGATTTATGGCCTCAATTGCATATCAAGTTCAATAAACTTGAGGGATATTTCAGCTGAGAGCAACAATCAAAGTGAAATTTACAACAGCGACAATGTTATTGATGTTAGTAACAGCGTAAGTATCAGCATTGTTGATCCGCCTACTTCAAATGCCATTTTGGACGAGTTTTGCACATTGAAGGGCAGGGATTTTCTGAATCCATCAGATTGCATGGTGAGCAACATAAGTATAAACCAGGATGTTCAATCTCAGATAACATCCACAAGTTTAGCGGAGTCACACGCCTTTTCTGTGCAAGACATCCATGACAACTCGGGTGGTGCATCGTCCAGCCTTGTCGATTTTGATGAAAGCAGTTTTCTGCCAAATAATTCATGGTCACAACAAGTAGCTGCGCAGGCTGCATGTAGGCGTACCTATACGAAGGTTCAGAAGGCAGGATCTGTAGGAAGATCAATTGATGTCACTAATTTCAAGAACTACGAGGAACTAATCAGTGCAATCGAATGCATGTTTGGACTTGAGGGTCTGCTAAATGACACCAGAGGATCAGGATGGAAGTTGGTATATGTAGATTATGAGCATGATGTTCTGCTAGTTGGGGATGACCCTTGGAAGGAATTTGTGGGTTGTGTCCGCTGCATAAGAATTTTATCACCTACGGAAGTAGAGCAAATGAGTGAAGAAGGGATGGCGCTTCTTAATAGTGGTGCATTACAAGGGATGAATGGTTGCATATAA 2754 0.4208 MLMRVERMENKNRMASMEGGGVVGVQTLAADIKLLKEMKEQNVVGKSFSTELWHACAGPLVSLPQVGSLAYYFPQGHSEQLAASTRRRAATSQVPNYPNLPSQLLCQVQNVTLHADQETDEIYAQMSLQPLNSENDVFPISEFGVKPSKHPSEFFCKILTASDTSTHGGFSVPRRAAEKLFPLLDYAMQPPTQELVVQDLHNNTWKFRHIYRGQPKRHLLTTGWSLFVGVKRLKAGDSVLFIRDEKSQLLVGIRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKAVYGTQVSVGLRFGMMFETEESNKRRYMGTIVGICDLDPLSWPGSKWRNIQVEWDEPGCSEKQKRVSSWDIETPENFFIFPSLTSTLKRPLQSGLLGPENDWNSLVRRPFMRVPANGTAEFSSTIPNLYQEQMMKFLLKPQLVNNTGTCSWAPQQEFAAKRGPSEEFMSTHPTDNQRVIADSVGMPKQNLHYFQTEQDQSNALKPLAKVDNPSSSGTVTDYVKLEPELFSNHMFNFPSMEGCNSEKMSTNYVNPESLAGQLAFLNQNQNPIGVDVPSSGSAIVDSLLPQLDSDEWMMYSSCQNGFTEPLSTLQEHSALPSQAVNLPLPSVSQDMCDSYLKNSKFLTHAEKLTSISQQEIYGLNCISSSINLRDISAESNNQSEIYNSDNVIDVSNSVSISIVDPPTSNAILDEFCTLKGRDFLNPSDCMVSNISINQDVQSQITSTSLAESHAFSVQDIHDNSGGASSSLVDFDESSFLPNNSWSQQVAAQAACRRTYTKVQKAGSVGRSIDVTNFKNYEELISAIECMFGLEGLLNDTRGSGWKLVYVDYEHDVLLVGDDPWKEFVGCVRCIRILSPTEVEQMSEEGMALLNSGALQGMNGCI 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0120 917 SUPERFAMILY CAD & PB1 domains 815 888 - -
Lal21g0120 917 ProSiteProfiles PB1 domain profile. 809 893 IPR000270 GO:0005515
Lal21g0120 917 Gene3D - 319 390 - -
Lal21g0120 917 Gene3D - 805 898 - -
Lal21g0120 917 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 36 913 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lal21g0120 917 SMART B3_2 155 257 IPR003340 GO:0003677
Lal21g0120 917 SUPERFAMILY DNA-binding pseudobarrel domain 145 284 IPR015300 -
Lal21g0120 917 PANTHER AUXIN RESPONSE FACTOR 5 36 913 - -
Lal21g0120 917 Pfam Auxin response factor 281 364 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lal21g0120 917 Pfam AUX/IAA family 853 894 IPR033389 -
Lal21g0120 917 Pfam B3 DNA binding domain 155 256 IPR003340 GO:0003677
Lal21g0120 917 CDD B3_DNA 154 255 IPR003340 GO:0003677
Lal21g0120 917 Gene3D - 153 256 IPR015300 -
Lal21g0120 917 ProSiteProfiles B3 DNA-binding domain profile. 155 257 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0120 Lal-Chr21 825023 830741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0120 27 917 B3 DNA Binding Superfamily AT1G19850 56.100 0.0 922
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lal21g0120 AUX_IAA 4.3e-10 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0120 21 825023 830741 Lal21g0120 21 825023 830741 ECH