Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0119 ATGTCCTTCATCAAAATCCAATGCATAGGGAGGCTCCGCCAAATTCTACGGCAATGGCGCGACAAGGCCTACAGGTCAAGTCATCGTACACCGTCCGATGTACCATCAGGACACTTGGCAGTACGTGTGGGCATAAACCACACGAGATTTGTGGTGCGCGCATCGTACCTGAACCATCCCATATTCAAGAAGCTATTAGTCGAAGCAGAAGAAGAATACGGTTTTTCAAACCATGGTCCACTAGCTATTCCATGCGAGGAAGTGACCTTTCAAGAAGTGATTCGTTTCATTTCGCGGTCTGAGTCAGGGATTGAATCTCAACCGTTGCTTCATCATCATAGAATGCAACGCTATATTGAGGATTGA 366 0.4672 MSFIKIQCIGRLRQILRQWRDKAYRSSHRTPSDVPSGHLAVRVGINHTRFVVRASYLNHPIFKKLLVEAEEEYGFSNHGPLAIPCEEVTFQEVIRFISRSESGIESQPLLHHHRMQRYIED 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0119 121 Pfam Auxin responsive protein 11 96 IPR003676 GO:0009733
Lal21g0119 121 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 3 104 - -
Lal21g0119 121 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0119 Lal-Chr21 818097 818462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0119 5 106 Calmodulin-binding Proteins AT4G34750 57.692 2.34e-37 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0119 K14488 - zju:107420382 154.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0119 21 818097 818462 Lal21g0119 21 818097 818462 ECH
Lal8g0545 8 3742893 3743348 Lal21g0119 21 818097 818462 PCT
Lal10g0877 10 16298949 16299407 Lal21g0119 21 818097 818462 PCT
Lal21g0119 21 818097 818462 Lal8g0545 8 3742893 3743348 PCT
Lal21g0119 21 818097 818462 Lal10g0877 10 16298949 16299407 PCT