Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0118 ATGGCTTTAAGAAAATCCACTAGACATTCCCAAAAAGCACTTATCAAACAAATCCTCAAAAGATGCTCAAGTTTAGGGAAGAAACAACAACGCTATAATGATGATGATCAAGTTCTCCATTTGGACGTGCCAAAGGGTCATTTTGTTGTATATGTTGGAGAAAACAGAAGCAGGTACATTGTTCCTATTTCTTTTTTAAGTCGCCCTGAGTTTCAAACTTTGCTCCATCAAGCAGAAGAAGAGTTTGGCTTTGATCACGAAAGGGGTCTTACAATTCCTTGCGAAGAATATGTTTTTGAGTCTCTTACTTCCACACTCTGGTGA 324 0.3827 MALRKSTRHSQKALIKQILKRCSSLGKKQQRYNDDDQVLHLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQTLLHQAEEEFGFDHERGLTIPCEEYVFESLTSTLW 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0118 107 Pfam Auxin responsive protein 20 105 IPR003676 GO:0009733
Lal21g0118 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 106 IPR003676 GO:0009733
Lal21g0118 107 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 7 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0118 Lal-Chr21 811081 811404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0118 42 102 Calmodulin-binding Proteins AT3G43120 55.738 5.36e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0118 K14488 - fve:101313088 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0118 21 811081 811404 Lal15g1507 15 17201197 17201502 ECH
Lal21g0118 21 811081 811404 Lal23g1461 23 14967820 14969256 ECH
Lal21g0118 21 811081 811404 Lal21g0118 21 811081 811404 ECH
Lal21g0118 21 811081 811404 Lal4g0072 4 423699 424016 LSH