Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0088 ATGGGTTGTTTCCACTCATGCGTTTCTAAACACTCTACTCATTCTCCTCTTCCTACACCATACGACACCGTTCATTCTCCTTCTCACAATGCACGTCACAACGTTCCCTCTTTCTCCGAGTTCTCCCTCTCCGACCTTAAATCCGCCACCAACGACTTCAGCTCCGATCACATTGTGTCTGAGAGCGGCGGAAAAGCGGCGAATGTTGTTTACAAAGGTCGGCTCCATAACCATAACCATCGTTGGATTGCAGTTAAGAGATTCCCTAAATCAGCATGGCCTAATCCCAAGCAATTTGCGGATGAAGCTTGGGGAGTTGGGAAATTGAGGAACCATAGGGTTGCTAATTTGATTGGTTATTGTTGTGATGGTGATGAGAGACTCCTTGTTTCAGATTACATGCCTAATGACACTCTTGCCAAACATCTTTTTCACTGGGAAAATCAGACAATTGAGTGGAGCATGAGGTTAAGAGTTGCCTTATCCATCGCTGAAGCTTTAGAGTATTGTCGTAGCAAAGGTCATCCGTTATACCATGACTTGAATGCTTACAGAGTTCTATTTGATGAGAATGGTGACCCCAGGCTTTCGTGTTTTGGGTTGATTAAGAACAGCAGGGACGGGAAAAGTTATAGCACAAATCTTGCTTATGCACCTCCCGAGTATCTGAGAAATGGGAGGGTGACTCCAGAAAGTGTTATCTTCAGTTTTGGGACTGTATTATTGGATCTTCTTAGTGGCAAGCATATCCCTCCAAGTCATGCTCTTGACATGATAAAGGGTAGAAATATTCAACTCCTTATGGATTCACATTTGGAGGGGAACTTCTCAACAGAAGAGGCAACAGTGGTTTTTGATCTTGCCTCACAGTGTTTGCAGTATGAACCTCGGGAGCGGCCGAAGACCAAGGACCTTGTGACAACACTTTCTGCTTTACAAATGAAACCTGATGTTCCATCACATGTTATGCTTGGAATTCCAAAGCACGAGGAAACACCTCCTACCCCACAGCATCCTCCATCTCCATTTGGTGATGCTTGTTCTCGCCTGGACCTTACAGCTATTCATCAGATTTTGTTGATGACACATTACAGGGATGATGAAGGGACTAATGAGTTGTCTTTCCAAGAGTGGACCCAGCAAATGAGGGATATGTTGGAGGCAAGAAAGCGTGGTGACTTGGCATTTCGTGACAAGGATTTCAAAACTTCAATTGAGTGTTACTCCCAGTTCATCGATGGTGGAACCATGGTTTCCCCAACTGTCTATGCTCGGAGAAGTCTATGCTTTCTCTTTTGTGATCAACCAGATGCTGCTCTACGAGATGCAATGCAAGCTCAATGTGTCTATCCTGACTGGCCTACAGCATTTTACATGCAATCAGTAGCACTTTCCAAATTAAACATGACTCAGGATGCCAGTGACATGTTGAGTGAGGCCGCTGCTTTAGAAGAAAAAAGGCAACAAGGGAAAGGGCACTAA 1482 0.446 MGCFHSCVSKHSTHSPLPTPYDTVHSPSHNARHNVPSFSEFSLSDLKSATNDFSSDHIVSESGGKAANVVYKGRLHNHNHRWIAVKRFPKSAWPNPKQFADEAWGVGKLRNHRVANLIGYCCDGDERLLVSDYMPNDTLAKHLFHWENQTIEWSMRLRVALSIAEALEYCRSKGHPLYHDLNAYRVLFDENGDPRLSCFGLIKNSRDGKSYSTNLAYAPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIKGRNIQLLMDSHLEGNFSTEEATVVFDLASQCLQYEPRERPKTKDLVTTLSALQMKPDVPSHVMLGIPKHEETPPTPQHPPSPFGDACSRLDLTAIHQILLMTHYRDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTSIECYSQFIDGGTMVSPTVYARRSLCFLFCDQPDAALRDAMQAQCVYPDWPTAFYMQSVALSKLNMTQDASDMLSEAAALEEKRQQGKGH 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0088 493 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 491 IPR045845 GO:0004672|GO:0009742
Lal21g0088 493 ProSiteProfiles Protein kinase domain profile. 56 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0088 493 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 1 491 - -
Lal21g0088 493 SUPERFAMILY Protein kinase-like (PK-like) 31 321 IPR011009 -
Lal21g0088 493 SUPERFAMILY TPR-like 386 489 IPR011990 GO:0005515
Lal21g0088 493 Gene3D Tetratricopeptide repeat domain 383 492 IPR011990 GO:0005515
Lal21g0088 493 Gene3D Phosphorylase Kinase; domain 1 27 133 - -
Lal21g0088 493 Gene3D Transferase(Phosphotransferase) domain 1 135 326 - -
Lal21g0088 493 Pfam Protein tyrosine and serine/threonine kinase 69 309 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0088 Lal-Chr21 604151 608234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0088 41 336 Glycoside Hydrolase AT3G07070 33.333 5.42e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lal21g0088 PK_Tyr_Ser-Thr 1.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0088 K14500 - qsu:111999979 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0088 21 604151 608234 Lal21g0088 21 604151 608234 ECH