Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0077 ATGAGTTGCTTCTCTTGCATTTGTTCTCGTCGCAAAGATGTTAGTAGAATCCAAATTGACAAGGCCTCTCGATCTGCTTCTTCAGTTACGGAGGGTGATAGGAAGAAGGAATACTCAAATGGGAAGAGAAGTACAAGAGCAGCAGCTAGTTTTGGATTCAGGGAGTTAGCAGAAGCAACAAAGGGTTTCAAAGAAGTGAACTTGATTGGGGAAGGAGGTTTTGGAAGGATTGTTGCCATAAAACAATTAAGTCTTGATGGTCATCAAGGTTTTCAGGAATTTGTCACTGAGGTTCTTATGTTAAGCCTATTACACCATTCTAATCTTGTTAAGTTAATTGGCTACTGCACTGATGGAGATCAAAGGCTTTTGGTTTATGAATACATGCCTATGGGATCCCTCGAAGATCATCTTTTCGATAATAACCAAGGAAAAGAGCCATTAAGTTGGAATGTTCGGATGAAGATTGCTGTTGGGGCTGCTCGGGGCCTTGAGTATCTCCATTGTAAAGCTGATCCACCTGTTATTTATCGAGACTTGAAATCAGCGAACATCTTGTTAGATAATGAATTCAGCCCAAAACTGTCAGATTTTGGGCTTGCCAAACTTGGTCCTGTTGGAGACAAGACCCATGTTTCAACGAGAGTGATGGGAACATATGGATACTGTGCGCCAGAGTATGCCATGAGTGGCAAATTAACTCTTAAATCTGATATCTACAGCTTTGGTGTGGTTTTGTTGGAGTTGATCACCGGACGTAGGGCAATAGATGGAAGTAGAAGACCAGGGGAGCAAAACTTAGTTTCATGGTCTCGTCCATTTTTCAGCGACAGGAGAAAGATTACACTAATGGCTGACCCACTTTTGCATGGAAACTTCCCAGTGCGCTGTTTGCATCAGGCGATTGCTATAACTGCAATGTGTCTCCAGGAGCAACCAAAAGTTCGTCCACTTGTTGGTGATATTGTTGTTGCGCTGGAGTACTTAGCTTCTCAGAGTAATACACATGATGTTCATAGACATGGTGTGCGCAACCCACCGCTGCAGCCTTCAGAAATAGACAGAAATTAA 1071 0.4267 MSCFSCICSRRKDVSRIQIDKASRSASSVTEGDRKKEYSNGKRSTRAAASFGFRELAEATKGFKEVNLIGEGGFGRIVAIKQLSLDGHQGFQEFVTEVLMLSLLHHSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFDNNQGKEPLSWNVRMKIAVGAARGLEYLHCKADPPVIYRDLKSANILLDNEFSPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDGSRRPGEQNLVSWSRPFFSDRRKITLMADPLLHGNFPVRCLHQAIAITAMCLQEQPKVRPLVGDIVVALEYLASQSNTHDVHRHGVRNPPLQPSEIDRN 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0077 356 MobiDBLite consensus disorder prediction 336 356 - -
Lal21g0077 356 Pfam Protein kinase domain 74 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0077 356 CDD STKc_IRAK 69 327 - -
Lal21g0077 356 PANTHER OS07G0668900 PROTEIN 29 340 - -
Lal21g0077 356 PANTHER OS07G0668900 PROTEIN 29 340 - -
Lal21g0077 356 ProSiteProfiles Protein kinase domain profile. 63 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0077 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Lal21g0077 356 Gene3D Transferase(Phosphotransferase) domain 1 129 345 - -
Lal21g0077 356 Gene3D Phosphorylase Kinase; domain 1 36 128 - -
Lal21g0077 356 SMART serkin_6 63 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0077 356 SUPERFAMILY Protein kinase-like (PK-like) 42 327 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0077 Lal-Chr21 535533 538765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0077 1 352 Glycoside Hydrolase AT3G07070 55.673 6.90e-142 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lal21g0077 Pkinase 7.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0077 - - gmx:100796595 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0077 21 535533 538765 Lal21g0077 21 535533 538765 ECH