Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0073 ATGGAGTTGTTTTCAAGTCTGTCAGCGATCGAACCGGTCAGACCATCCAATCCGATCCGGATATCACAATACTTGTGTGTGTTTTTGTTTACCCATTGGAGCAGCGATGATTGCGCGGGTTTGAAAGTCCACATTGCACGCAAGAAACAATTATTCCCACGGATTCCAAAGGATTTGGTTTTGAATAAAGAAAGTAATAATGCAAAGTTATTAATTAGGAATAAGGTGCAAAGGGAGATTGTGAAATCAATGGAAGAGATAAAGAAGAAGAAGAACATGAGTAGTAATAATAATAATAATGGAATTGGAGGAAGCAATAACTTGTATATGAAAGTAATGAGTGATGAACAAATGGAAGAGCTTAGGCAACAAATATCTGTGTATGGCACTATTTGTGATCAACTTGTTCAGATGCATAACTCCATCACTTCTCAACAAGACCTTGTTGGACTGAGACTAGGTAGTTTGTATTGTGATCCAATGATGGGATGTTCTGGACACAAGATAAGTGCAAGACAACGTTGGACTCCAACACCTCTTCAGCTTCAATTGTTAGAACGTATTTTTGATGAAGGCAATGGTACTCCAACCAAACAGAAAATCAAAGACATAACCAATGAACTTGGACAACATGGTCCAATTTCTGAGACAAATGTCTATAATTGGTTTCAGAATAGAAGAGCTCGTTCTAAAAGGAAGCAACTAGCTCCTACATCAATTAATAATATTAATAATAATAATAATAATGCAGAACCTGAAGCTGAAACAGAACTTGACTCTCCAAAACAAAAGAAGACAACACCTCAAAGCTTTCAACTTCAACCCTATGACTATGACAATTCATCACCACATTCATTATACATTCACAGTCCTGACATAGGATTTGACCAACTGATGAGTAAAATAGAAGTTTCAGGCTGCTACAGCTCTTATTTTCTTTGA 942 0.3673 MELFSSLSAIEPVRPSNPIRISQYLCVFLFTHWSSDDCAGLKVHIARKKQLFPRIPKDLVLNKESNNAKLLIRNKVQREIVKSMEEIKKKKNMSSNNNNNGIGGSNNLYMKVMSDEQMEELRQQISVYGTICDQLVQMHNSITSQQDLVGLRLGSLYCDPMMGCSGHKISARQRWTPTPLQLQLLERIFDEGNGTPTKQKIKDITNELGQHGPISETNVYNWFQNRRARSKRKQLAPTSINNINNNNNNAEPEAETELDSPKQKKTTPQSFQLQPYDYDNSSPHSLYIHSPDIGFDQLMSKIEVSGCYSSYFL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0073 313 Coils Coil 73 93 - -
Lal21g0073 313 CDD homeodomain 172 234 IPR001356 GO:0003677
Lal21g0073 313 SMART HOX_1 170 237 IPR001356 GO:0003677
Lal21g0073 313 MobiDBLite consensus disorder prediction 238 278 - -
Lal21g0073 313 PANTHER WUSCHEL-RELATED HOMEOBOX 13 95 313 IPR044559 GO:0003700
Lal21g0073 313 MobiDBLite consensus disorder prediction 263 278 - -
Lal21g0073 313 SUPERFAMILY Homeodomain-like 170 234 IPR009057 -
Lal21g0073 313 Pfam Homeodomain 172 232 IPR001356 GO:0003677
Lal21g0073 313 MobiDBLite consensus disorder prediction 238 254 - -
Lal21g0073 313 Gene3D - 174 237 - -
Lal21g0073 313 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 95 313 - -
Lal21g0073 313 ProSiteProfiles 'Homeobox' domain profile. 168 233 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0073 Lal-Chr21 517886 520886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0073 108 234 Wox Gene Family AT4G35550 72.441 1.18e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lal21g0073 Homeodomain 7.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0073 - - var:108342525 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0073 21 517886 520886 Lal21g0073 21 517886 520886 ECH