Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0069 ATGAATTTGTGTTGGGTTGTGCTTTTGGGAGTATCACTATCTTCCTATGTGGCTGCAACAGATGCTTCTTCTTCAAGACCTGCCATTGTGAACATTGGAGCTATCTTCACCTTTGATTCCACCATTGGGAAAGTGGCTAAAATTGCAATGGAGGAAGCAGTCAAGGATGTCAACGCCGATTCCAGCGTTCTTCGTGGATCTAAACTTGTTCTCAATTTGCAAAACTCCAATTGTAGTGGTTTCGTAGGAATGATTCAAGACTCTTCGCTTGCAAGGGTAAAGTTGTGTTCATTTCCTCTAGTAGCTTTGAGGTTCATGGAGAGTGATGTCATAGCTATAATAGGTCCACAATCTTCTGTAGTTGCACACATAATATCCCATGTTGCAAATGAGCTCAAGGTTCCTCTATTGTCATTTGCTGCAACAGACCCTACCCTCTCATCTTTGCAATTCCCTTTTTTTGTGAGGACCACACAGAGTGATCTATACCAAATGGCTGCAGTTGCTGAAATTATTGATTATTATGGTTGGAAGGAAGTCATTGCAATTTACATAGATGATGATTACGGACGAAATGGTGTGTCTGTGTTACATGATCAACTTGCAGGTAGACGCTGTAGAATCTCTTACAAAGTTGGATTTAACTCGGGAGTTAGCCGAGGAGAAATCACTGATTTGCTTGTCAGGGTGGCAGTTTTGCAATCTCGTGTCATTGTTCTACATGTAAACCCTGATTCCGGATTCATGATCTTTAATGTGGCACGCTATCTCGGGATGACAGGGAATGGACATGTGTGGATAGCCACGGACTGGCTCTCTGCTGTTCTAGATTCTTCTTCTCTCCCTTCGGAGACGATGGATCTTCTGCAAGGAGTACTTGTTTTGCGCCACCACACACCTGATTCTGATAGAAAAAGAGCATTTTTGTCGAGGTGGAAAAAGTTAACCGGTCACTCCTTAGGTTTACATTCTTATGGCCTCTATGCATATGATTCTGTTTGGCTTGTCGCGCGGGCTATTGATAAATTTCTCGATCAGGGTGGGATCATTTCCTTTACCAATATCACATGGTTACGTGATGCTAAGGAAGGTGGTCTTAACCTTGATGCGATGAGTGTTTTTGATAATGGAACGCTTCTGTTGAATAACATAATGCTGAGTGATTTTGTAGGATTAACAGGTCCTATGAAGTTTGCACCAGACAAATCTCTTGTCCATCCTGCGTATGATATTATGAATGTGGCTGGAACTGGCTTTCGCCGGGTCGGTTACTGGTCCAACTATTCTGGTCTGTCAATTCTACCTCCTGAGACATTGTATGCTAAGCCACCAAATAGATCAAGTGCAAACCAACAACTTAACAGTGTAATATGGCCTGGAGAAAGATTATCCAAACCCCGCGGATGGGTCTTCCCAAATAATGGAAAACAATTGAGAATCGGTGTGCCTATCCGGGTCAGTTACCGAGAATTTGTGTCGCCAATTCCTGGAATAGATATGTTTAAAGGGTTCTGCATTGATGTATTCACATCAGCTGTAAACTTGTTACCATATGCTGTTCCTTACCACTTTGTCCCATTTGGAGATGGTAAAAATAATCCGAGTTATACAGAAATTGTCACTTTAATTTCCACTGGGTACTTTGATGGTGCTATTGGTGACATTGCCATTGTCACTAATCGGACAAAGATTGTCGATTTTACTCAGCCATATGCTGCATCTGGACTTGTTGTTGTGGCCCCTTTCAAGAAAACCAATTCTGGTGGTTGGTCATTCCTGCAACCATTCACTCCTCTTATGTGGATTGTCACTGCCTCCTTCTTCCTTTTTATTGGGATGGTTGTATGGATTCTGGAACACAGAATAAATGATGAGTTCAGGGGCTCACCTAAACAACAATTTATAACCATTTTATGGTTTAGCCTATCAACTCTATTCTTTTCTCACAGAGAAAATACGATGAGCACTCTAGGTCGCTTGGTGTTACTGATATGGATGTTTGTGGTATTGATCATCAACTCTAGCTACACTGCAAGTTTAACATCAATTCTCACAGTGCAGAAGTTATCTTCTCCTATCAGCGGAATAGATAGCTTAAAAGCTAGCAACGAACCTATAGGGTTCCAAGTAGGTTCGTTCGCAGAACATTATCTGCATGAGGATATCGGAATATCCAAATCTAGGTTGGTTCCCCTTGGATCTCCAGAAGAGTATGCTATTGCACTCCAGCTTGGTCCTAGTAAAGGAGGTGTCGCTGCTATTGTCGATGAACGGCCGTATCTTGAGATCTTCTTATCAACTCAGTGCACATTCAGGATTGTAGGCCAGGAGTTCACTAGAAGTGGCTGGGGTTTTGCATTCCCTCGGGACTCTCCTTTGGCTGTGGATTTGTCAACTGCCATTCTACAACTTTCTGAAACCGGTGATCTGCAGCGCATTCATGACAAATGGATGACACGAAGCATGTGTAGTTTAGACGATGATGAAATTGATGCGGATCGGCTTAAGCTTAAAAGCTTCTGGGGTCTTTTTCTTATTTGCGGGATAGCTTGCTTTATAGCTCTTGTCATATATTTTTTGCAGATTATGGTACAGTTAAGGCATTCTGATCCTGCTCATCCTGCTGCTAATGTTAACTCAATTTCGGGTCGTTTTCAAAGATTTCTTTCACTAATTGATGAGAAGAAAGATCCTTCAAAGAAGGATAATAGAAGAAAAAGAAATGGAGAGGAAATATCATACGAAGATCAAATAGAGAGGCAGCCAAAGAGGATACAAACAGAAATAACAGCTGAGTTCAACTCAAAACAATTAACCCTTTGA 2823 0.4173 MNLCWVVLLGVSLSSYVAATDASSSRPAIVNIGAIFTFDSTIGKVAKIAMEEAVKDVNADSSVLRGSKLVLNLQNSNCSGFVGMIQDSSLARVKLCSFPLVALRFMESDVIAIIGPQSSVVAHIISHVANELKVPLLSFAATDPTLSSLQFPFFVRTTQSDLYQMAAVAEIIDYYGWKEVIAIYIDDDYGRNGVSVLHDQLAGRRCRISYKVGFNSGVSRGEITDLLVRVAVLQSRVIVLHVNPDSGFMIFNVARYLGMTGNGHVWIATDWLSAVLDSSSLPSETMDLLQGVLVLRHHTPDSDRKRAFLSRWKKLTGHSLGLHSYGLYAYDSVWLVARAIDKFLDQGGIISFTNITWLRDAKEGGLNLDAMSVFDNGTLLLNNIMLSDFVGLTGPMKFAPDKSLVHPAYDIMNVAGTGFRRVGYWSNYSGLSILPPETLYAKPPNRSSANQQLNSVIWPGERLSKPRGWVFPNNGKQLRIGVPIRVSYREFVSPIPGIDMFKGFCIDVFTSAVNLLPYAVPYHFVPFGDGKNNPSYTEIVTLISTGYFDGAIGDIAIVTNRTKIVDFTQPYAASGLVVVAPFKKTNSGGWSFLQPFTPLMWIVTASFFLFIGMVVWILEHRINDEFRGSPKQQFITILWFSLSTLFFSHRENTMSTLGRLVLLIWMFVVLIINSSYTASLTSILTVQKLSSPISGIDSLKASNEPIGFQVGSFAEHYLHEDIGISKSRLVPLGSPEEYAIALQLGPSKGGVAAIVDERPYLEIFLSTQCTFRIVGQEFTRSGWGFAFPRDSPLAVDLSTAILQLSETGDLQRIHDKWMTRSMCSLDDDEIDADRLKLKSFWGLFLICGIACFIALVIYFLQIMVQLRHSDPAHPAANVNSISGRFQRFLSLIDEKKDPSKKDNRRKRNGEEISYEDQIERQPKRIQTEITAEFNSKQLTL 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0069 940 SUPERFAMILY Periplasmic binding protein-like II 456 821 - -
Lal21g0069 940 Pfam Bacterial extracellular solute-binding proteins, family 3 503 819 IPR001638 -
Lal21g0069 940 Gene3D - 160 431 - -
Lal21g0069 940 Gene3D - 473 588 - -
Lal21g0069 940 Gene3D - 589 720 - -
Lal21g0069 940 Gene3D - 48 406 - -
Lal21g0069 940 Gene3D - 748 783 - -
Lal21g0069 940 Pfam Ligand-gated ion channel 820 851 IPR001320 GO:0015276|GO:0016020
Lal21g0069 940 PIRSF IGluLR_plant 1 939 IPR017103 -
Lal21g0069 940 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 18 930 - -
Lal21g0069 940 MobiDBLite consensus disorder prediction 896 918 - -
Lal21g0069 940 Gene3D - 784 817 - -
Lal21g0069 940 SUPERFAMILY Periplasmic binding protein-like I 25 470 IPR028082 -
Lal21g0069 940 SMART GluR_14 479 820 IPR001320 GO:0015276|GO:0016020
Lal21g0069 940 PRINTS Metabotropic glutamate GPCR signature 113 139 IPR000337 GO:0004930|GO:0007186|GO:0016021
Lal21g0069 940 PRINTS Metabotropic glutamate GPCR signature 145 164 IPR000337 GO:0004930|GO:0007186|GO:0016021
Lal21g0069 940 PRINTS Metabotropic glutamate GPCR signature 164 180 IPR000337 GO:0004930|GO:0007186|GO:0016021
Lal21g0069 940 PRINTS Metabotropic glutamate GPCR signature 180 197 IPR000337 GO:0004930|GO:0007186|GO:0016021
Lal21g0069 940 PANTHER GLUTAMATE RECEPTOR 3.3 18 930 - -
Lal21g0069 940 CDD GluR_Plant 476 817 - -
Lal21g0069 940 Pfam Receptor family ligand binding region 48 416 IPR001828 -
Lal21g0069 940 CDD PBP1_GABAb_receptor_plant 31 432 IPR044440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0069 Lal-Chr21 491433 496136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0069 24 909 Ion Channels AT1G42540 63.929 0.0 1220
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0069 21 491433 496136 Lal21g0069 21 491433 496136 ECH