Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0062 ATGATGTTATCAATGGAAGCTGTGCTGAGTGAGCTTAGTGATCATGAAAAGAGGAATGAGCAAGGTTTGCCACCTGGTTTTAGGTTTCACCCTACTGATGAAGAACTTTTAACATTTTATCTTGCTTCAAAGGTCTTTAATGGAACCTTCACTACTCATCTCAACTTTGCTGAGGTTGACCTCAATAGATGTGAGCCATGGCAACTTCCAGAAGGGGCAAAAATGGGGGAAAGAGAGTGGTATCTGTTCAGCATGAGGGACAGAAAATACCCAACAGGGTTAAGAACAAACAGAGCAACTGGTGCAGGGTACTGGAAGGCCACTGGGAAGGACAAAGAAGTGTACAATGCATCAAGTGGAGCCCTACTTGGAATGAAGAAGACCCTTGTTTTCTACACTGGCAGGGCCCCACATGGTGAAAAGACCAAATGGGTCATGCATGAATATCGTTTGGATGCTCATTTCTCCCTTCACTCTCACCCTCCTAATAACCCCTTTAACTCTAAGGAGGAATGGGTGATATGCAGAATATTTCATAAATGTGGGGAAAAGAGAACTCAGGTGCTCCAAATTCAAGGACATTTGGGTGCTTGTTCAAAAAGTTATTTACCTCCATTTCATACAACTTCACCCTCCTTTACATGTCATCAATTCCAAAATGACCTCTCCCACTCTCACCTTTTCCCATTCCACCCTTGTGCTCCTACTAATGCACTCACCAACAATGATGCACTAAATTGCTGCACCCTCAAGCTGATGAAGGAACATATGTATATTCCTAAATCAACCAAAACAGAAGATACATTCTACCCATACCAACTACTTGATGACACTAACATGTTGAGCAACACAAATTCAAGTCATTTCCAGAGCTCCTTGCCTCTTAATATTATGGATGATAATAATGGCCTAATGTTGGGGTTCTCAGGAGCTGCAAATGCTGAATTTAGGGACATGATGATGTCTGCTTCAACACCTTTCAATAAACAAGGCTTACAGCAGATGCTAGATTCTCCTATTGCAATAGATTCTTGGCCTTTTCCGCAGCATGTTTAA 1056 0.4205 MMLSMEAVLSELSDHEKRNEQGLPPGFRFHPTDEELLTFYLASKVFNGTFTTHLNFAEVDLNRCEPWQLPEGAKMGEREWYLFSMRDRKYPTGLRTNRATGAGYWKATGKDKEVYNASSGALLGMKKTLVFYTGRAPHGEKTKWVMHEYRLDAHFSLHSHPPNNPFNSKEEWVICRIFHKCGEKRTQVLQIQGHLGACSKSYLPPFHTTSPSFTCHQFQNDLSHSHLFPFHPCAPTNALTNNDALNCCTLKLMKEHMYIPKSTKTEDTFYPYQLLDDTNMLSNTNSSHFQSSLPLNIMDDNNGLMLGFSGAANAEFRDMMMSASTPFNKQGLQQMLDSPIAIDSWPFPQHV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0062 351 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 267 - -
Lal21g0062 351 SUPERFAMILY NAC domain 18 180 IPR036093 GO:0003677|GO:0006355
Lal21g0062 351 Gene3D NAC domain 32 184 IPR036093 GO:0003677|GO:0006355
Lal21g0062 351 Pfam No apical meristem (NAM) protein 24 151 IPR003441 GO:0003677|GO:0006355
Lal21g0062 351 ProSiteProfiles NAC domain profile. 23 180 IPR003441 GO:0003677|GO:0006355
Lal21g0062 351 PANTHER PROTEIN CUP-SHAPED COTYLEDON 3 13 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0062 Lal-Chr21 456103 457740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0062 1 189 NAC Transcription Factor Family AT1G76420 68.783 3.71e-89 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal21g0062 NAM 6.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0062 - - gmx:100808967 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0062 21 456103 457740 Lal21g0062 21 456103 457740 ECH