Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0058 ATGGAAAATGAAGGGATCCAACTAATGAACTCTCCGTTGGGTGACACAACTTATACGAAGGTATTCGTTGGAGGATTGGCTTGGGAGACTCAAAGCGAAACCATGCGCCATTACTTTGAACAGTTTGGTGATATTCTAGAAGCTGTTGTTATCACTGATAAGAATACTGGCCGATCCAAAGGCTATGGCTTTGTGACTTTCCAGGATCCCGAAGCTGCTACGAGGGCTTGTGCTGATCCAGCTCCAATTATTGATGGTCGAAGGGCTAATTGTAATTTGGCTTCACTTGGTCGACCACGACATCCTCTGCCTTATGGACGGATAAGATCAGCCTCCCATTATGTTGGAAGTTTGCAACCAACTCGTGGTGCATATGCTGGAGGTTATGGCTACCAGCAACCAGTCGTCTCCTACAACTATCAGCAAGGATTGGTTTATCCTCCTTATGGGTATACGCCATATGGACCTGAGTACATTTACCCACAGAGTGTGTACAACCCTTACATGGGTCAACATTACCTTCAGATATATGGAGTGCCTGGGGCAGTGAACACAACGGTGTATCCTTATGGACAACTGGGTCAGGCTATTCCTAGCAATCATGGTTATACAGCAATGCAGGGCTACACCATACCTGGTCATCAGATAGTGCCCTATGGTGGATCAAATGTTAATGCCATATCAGCTTCACTCGTGCCTGCCATCCAAGCACCATACCCCAGTGGAATTGCTGCACCAGTTCCAGGCCAACCACAATTTGTTGTTCCTGCTCCTTCTCAGTTTATGCAAGGTAGTGGTCCTGACCAAACAGCCGGGTCATATGTAGTCATGCTCACCAAGTTGTGTCTGAGTCGCTCCAGATGGCAAGAGAAACTGGAATTTGAGGGTTTAAACTAA 897 0.4671 MENEGIQLMNSPLGDTTYTKVFVGGLAWETQSETMRHYFEQFGDILEAVVITDKNTGRSKGYGFVTFQDPEAATRACADPAPIIDGRRANCNLASLGRPRHPLPYGRIRSASHYVGSLQPTRGAYAGGYGYQQPVVSYNYQQGLVYPPYGYTPYGPEYIYPQSVYNPYMGQHYLQIYGVPGAVNTTVYPYGQLGQAIPSNHGYTAMQGYTIPGHQIVPYGGSNVNAISASLVPAIQAPYPSGIAAPVPGQPQFVVPAPSQFMQGSGPDQTAGSYVVMLTKLCLSRSRWQEKLEFEGLN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0058 298 SUPERFAMILY RNA-binding domain, RBD 11 113 IPR035979 GO:0003676
Lal21g0058 298 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 21 77 IPR000504 GO:0003723
Lal21g0058 298 SMART rrm1_1 20 92 IPR000504 GO:0003723
Lal21g0058 298 CDD RRM_RBM24_RBM38_like 19 94 - -
Lal21g0058 298 Gene3D - 14 98 IPR012677 -
Lal21g0058 298 PANTHER RNA-BINDING PROTEIN 38-LIKE ISOFORM X1 4 269 - -
Lal21g0058 298 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 19 96 IPR000504 GO:0003723
Lal21g0058 298 PANTHER BOULE-RELATED 4 269 IPR037366 GO:0003729
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0058 Lal-Chr21 437834 441207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0058 8 95 C2H2 Transcription Factor Family AT2G19380 39.773 3.74e-15 73.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0058 21 437834 441207 Lal21g0058 21 437834 441207 ECH