Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0048 ATGTTGGATCGGAGAAACATAGTGTTGTCGTTTTGGTCCTTGTTGTTTTTGTTCCTCTCACTGTTTCAGCTCACATTGGAGCAGAATATTGAGACACTGAGTTCACCCACTGAGCGTAAAGCACTTCTCCAACTAAGGGGCTCGCTTGGTTTGAGGAGCAGAGAATGGCCAATAAAACCAGACCCTTGTTTATTCTGGGTTGGAATAACATGCCAAAATGGTAGTGTTGTTGGGATCAATATCTCAGGGTTCAGAAGAACTAGACTTGGTAGAATAAACCCTCAATTTGCAGTTGATGCTTTGGCCAATTTCACTTTCTTGCACTCATTCAATGCCTCAAATTTCATTCTCCCGAGTCCTATTCCTGATTGGTTTGGACTTCGGTTAGGGTCCCTTCGCGTGCTTGATCTTCGGTCTTGCTCTATTATTGGTGCTATTCCTGGAAGTGTGGGGAATCTGACCAGCCTCACAAATTTGTATCTTTCTGATAACAAGCTTACTGGGACAGTTCCGGATAGCATCGGCCAACTCTTGGGGCTTTCAGTTCTTGATCTTTCGCGGAATTCGCTTACCGGGTCCATACCAACATCTTTGGCCATTCTTGTTAATCTGTCATCCCTTGACATGTCTTCCAATTTTTTGTCTGGGCCGATTCCACCGAGCATTGGGGGACTTTCCAAGTTACGATACTTGAATCTTTCAAGCAATGACCTAACTTCTCTACCATCGCAAATAGGGGGTCTTGGTAGCTTGGTTGACCTTGATCTCGGTGACAATTCTTTCACTGGTGGAGTAGTGCCTTCAGATTTGAAAGGGTTGAGGAACTTGCAGAGAATGATGCTTGGGAATAGCATGCTTGGTGGACCACTGCCTGGGAATTTGTTTGGTACTTCATCACAGTTGCGGTCTGTAGTGCTGAGACAAAACAATTTTACTGGTTCTTTGCCTCTTGAGTTGTGGTCGTTGCCAAAGTTGACTTTCCTCGATGCATCTGCCAATAACTTTGGCGGTTTGCTTCCTAATTTTAGTTCTGCACCTAACGGTACTATTGCTGTGCTTAATATTTCTCATAATGTGTTTTATGGAAACCTCACTCATGTACTTGGAAGGTTCGGGTTTGTGGATCTGTCAAACAATTATTTTGAGGGAAGGGTTCTAAATTTCATACATAATGCATCTTTAGCTAGAAACTGCCTTCAAAACATGACAAATCAGAGGACTACAGTGGATTGTGCATCATTTTATGCTGTAAGGGGACTCACTTTTGATAATTTTGGACGCCCAAATGCGACAAATCCCAGCACAGAAGATGGGTCTGGGAAGAGCAATAAAACTAAGATTATATTGGCAGCAGTCTTAGGTGGACTGGGTTTAATTGCATTTTTGGTGTTGCTGGCGGTATTCTTGCTTCTGTGCGCTCGTAAGCGGGGTAATTCAAATCAGAGGGGAAATGGTGTGGGTCCTGCTCCTGCCGGAGGCAGTCCTCCACATCCTACTGATGCACCAATTGATTTTTCAAATGTAGGAGAGTCGTTTACTTATCTTCAGTTGCTCCAAGCCACAGGAGATTTCAATGATGCAAATCTGATCAAACATGGTCACTCGGGGGATTTATTCAATGGTGTTTTGGATAGTGGAGTTCCTGTCGTCATCAAAAGGATCGACATGCGCTCAACTAAAAAGGATGCTTACCTATTGGAATTGGAATTTTTCAACAAGGTTTCTCATCAAAGATTTGTTCCCCTACTGGGCCATTGTTTAGAAAACGAGAATGAGAAGTTTCTGGTTTATAAAAATATACCAAATGGGGACTTGTCCAATTGCTTATACTTCAAAAAAACCACACCTGAAGATGGTACTTTGCAGTCATTAGACTGGATAACTAGGTTAAAAATTGCTACTGGAGCAGCAGAGGCCCTATCGTATCTGCATCACGAATGTATTCCACCCCATGTTCACAGGGATATTCAAGCAAGTAGTATACTTCTAGATGATAAATATGAAGTTCGGTTAGGGAGTCTAAGCGAAGTCTGCGCTCAAGAAGGCGATTCTCATCAAAGTAGAAGACTGCGATTTCTGCTATTGCCTCAGTCCTCTGATCCAAGCTCATCTGTTGATAATGGGAGCAATTTTCAGTCTCACAGAAAAGTTGGGCTTCTAGCCAATGCATTTTCAAAGAGGCTGTTGAAAGTCATTCTAAGTTCATCAACATCAGTTTGTGCCTATGACGTGTATTGCTTTGGGAAAGTGTTACTTGAGCTGGTAACTGGTAAACTGGGACTCAGTGCGTCCAGTGACAGTGAAGTAAAGGAATGGTTGGACCAAGTTCTACCTAACATTACTATGTATGACAAGGATCTTGTGACAAAAATCGTCGATCCATCTTTGTTTCTTGATGAGGATTTCTTAGAGGAAGTGTGGGCGATAGCTATTGTTGCCAGGTCTTGCCTTAATCCCAAACCTGCAAAACGACCCCCGATGAGATACGTTCTCAAGGCTTTGGAAAACCCTTTAAAAGTTGTTAGGGAAGAAAGCTCAAGCTCCGCAAGACTTAGAGCAACCTCTTCTAGAGGTTCTTGGAATGCTACTTTGTTCGGTAGTTGGCGTCATAGTTCATCTGATGTTGTAACAGTAGTAATTCCACCAGCCTCTGGTATATCAAGAGTAGAAGGAGCCGGTAGTTTAAAGCTTTCAGGAACGCCGGGCTCACAATCCCAGGGTAGTTTCCGCGACGGTGGTGATGGCATTTCATCATCGCAAAGACGTTACTCAAAGGAAATATTTCCCAAGCGGACTGGCTTACATGATGTAGAGAGGGTGGATCACGAGTAG 2832 0.4329 MLDRRNIVLSFWSLLFLFLSLFQLTLEQNIETLSSPTERKALLQLRGSLGLRSREWPIKPDPCLFWVGITCQNGSVVGINISGFRRTRLGRINPQFAVDALANFTFLHSFNASNFILPSPIPDWFGLRLGSLRVLDLRSCSIIGAIPGSVGNLTSLTNLYLSDNKLTGTVPDSIGQLLGLSVLDLSRNSLTGSIPTSLAILVNLSSLDMSSNFLSGPIPPSIGGLSKLRYLNLSSNDLTSLPSQIGGLGSLVDLDLGDNSFTGGVVPSDLKGLRNLQRMMLGNSMLGGPLPGNLFGTSSQLRSVVLRQNNFTGSLPLELWSLPKLTFLDASANNFGGLLPNFSSAPNGTIAVLNISHNVFYGNLTHVLGRFGFVDLSNNYFEGRVLNFIHNASLARNCLQNMTNQRTTVDCASFYAVRGLTFDNFGRPNATNPSTEDGSGKSNKTKIILAAVLGGLGLIAFLVLLAVFLLLCARKRGNSNQRGNGVGPAPAGGSPPHPTDAPIDFSNVGESFTYLQLLQATGDFNDANLIKHGHSGDLFNGVLDSGVPVVIKRIDMRSTKKDAYLLELEFFNKVSHQRFVPLLGHCLENENEKFLVYKNIPNGDLSNCLYFKKTTPEDGTLQSLDWITRLKIATGAAEALSYLHHECIPPHVHRDIQASSILLDDKYEVRLGSLSEVCAQEGDSHQSRRLRFLLLPQSSDPSSSVDNGSNFQSHRKVGLLANAFSKRLLKVILSSSTSVCAYDVYCFGKVLLELVTGKLGLSASSDSEVKEWLDQVLPNITMYDKDLVTKIVDPSLFLDEDFLEEVWAIAIVARSCLNPKPAKRPPMRYVLKALENPLKVVREESSSSARLRATSSRGSWNATLFGSWRHSSSDVVTVVIPPASGISRVEGAGSLKLSGTPGSQSQGSFRDGGDGISSSQRRYSKEIFPKRTGLHDVERVDHE 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0048 943 MobiDBLite consensus disorder prediction 480 502 - -
Lal21g0048 943 ProSiteProfiles Protein kinase domain profile. 524 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0048 943 PANTHER BNAA07G03560D PROTEIN 12 192 - -
Lal21g0048 943 PANTHER BNAA07G03560D PROTEIN 190 882 - -
Lal21g0048 943 PRINTS Leucine-rich repeat signature 180 193 - -
Lal21g0048 943 PRINTS Leucine-rich repeat signature 225 238 - -
Lal21g0048 943 SMART LRR_typ_2 225 248 IPR003591 -
Lal21g0048 943 SMART LRR_typ_2 201 224 IPR003591 -
Lal21g0048 943 SMART LRR_typ_2 153 177 IPR003591 -
Lal21g0048 943 SMART LRR_typ_2 322 344 IPR003591 -
Lal21g0048 943 Gene3D Ribonuclease Inhibitor 35 196 IPR032675 -
Lal21g0048 943 MobiDBLite consensus disorder prediction 924 943 - -
Lal21g0048 943 Pfam Protein tyrosine and serine/threonine kinase 530 672 IPR001245 GO:0004672|GO:0006468
Lal21g0048 943 Pfam Leucine Rich Repeat 227 243 IPR001611 GO:0005515
Lal21g0048 943 Pfam Leucine Rich Repeat 131 153 IPR001611 GO:0005515
Lal21g0048 943 SUPERFAMILY Protein kinase-like (PK-like) 502 835 IPR011009 -
Lal21g0048 943 Pfam Leucine rich repeat 155 212 IPR001611 GO:0005515
Lal21g0048 943 SUPERFAMILY RNI-like 98 400 - -
Lal21g0048 943 MobiDBLite consensus disorder prediction 892 943 - -
Lal21g0048 943 PANTHER RECEPTOR-LIKE PROTEIN 55 12 192 - -
Lal21g0048 943 PANTHER RECEPTOR-LIKE PROTEIN 55 190 882 - -
Lal21g0048 943 Gene3D Transferase(Phosphotransferase) domain 1 600 856 - -
Lal21g0048 943 Gene3D Ribonuclease Inhibitor 197 422 IPR032675 -
Lal21g0048 943 ProSiteProfiles Leucine-rich repeat profile. 227 248 IPR001611 GO:0005515
Lal21g0048 943 MobiDBLite consensus disorder prediction 897 923 - -
Lal21g0048 943 Gene3D Phosphorylase Kinase; domain 1 500 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0048 Lal-Chr21 364523 374341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0048 31 697 Miscellaneous Gene Families AT2G16250 56.166 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Lal21g0048 PK_Tyr_Ser-Thr 1.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0048 - - lang:109344030 1582.39