Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0034 ATGGCACCAACAATACTCCTCATGATTATTCTCTTTTTCTCAACCTCTTGTAATTCTACCTTCACTCCTAAAGATAACTTTCTTATAGATTGTGGTGCACAAAGTGTAGCAACCTTACCAGATGGAAGACAATTCAAGTCAGACCAACAAGCCAACTCATTCTTGAAAGCCAATGATGAGTACAAAGTTTCTAATGATGATGCCAATGATGCAATCAACCCTATATACAAAAATGCTAGGATTTTCATTCATGAGGCTCAATACTCATTCCCCTTGACTCAACCTGGTTTTCATTGGGTTCGCCTTCATTTCAATCCTATCAAAAACAATGTATTTGATCTTCAAAAGGCCACTTTCTCTGTCAACACAGATAAGTATGTTTTGCTTCACACCTTCAATATCAATAACAACAACAACAATAAGAATGCTACTAGTCCTATCCTTAAGGAGTTCCTCATCAATGTAACTCAACCTAAATTCACCATATCCTTCATTCCTCTAAAAAACTCAGCTGCTTTTATCAATGCCATTGAGCTTGTTTCAGCTCCTGATAACCTCATCTTTGACAATGCCGCAACCCTTTTCCCAGTGGGCCAGTTTTCAGGTTTAAGCAACTATGCTTTTCAACCTGTTTATCGCTTAAACAATGGAGGTCCTTTGATCACACCATCAAATGACACATTGGCAAGGATATGGGAATCTGATGAACCTTTCCTCACAAATAAGAACTTGGCAAAGAGTACTTCGGTGGCTACCAAAGTCATCATCTTCCCTGCTGATACGCCTACTATATCGCCTCTCATTGCGCCTCAAACTGTTTATGCTTCTGCCACTGAAATGGGTGATGCTGGTATTAACCAACCAAATTTCAATGTCTCATGGAAATTTGATGTAGACACTTCTTTTAGTTACCTGGTCAGATTGCATTTCTGTGACATTGTAAGCAAAGGGCTTAATGAACTCTATTTTAATGTCTATGTTAATGCAAAAATGGCGATTCCTAACTTGGATTTATCAGCTACTACTGGTGCTTTGGCAACACCATACTACAAGGACATTGTTGTCAATGCATCATTGATGTCTGAGGGACTAACTGTTCAGGTTGGTCCGACCGATGCTGAGGGAGTGAATGCAAATGCTATTATGAATGGAATAGAGGTTTTGAAGATAAGCAACTCTGTGGATAGTTTGGATGGAGAATTTGGAGTTGATGGAAGAAAAATTGGTGGTTCACATCGCGGGGCAGTGGCTGCAGTTGGATTTGGAATGATGTTTGGAGCCTTTGTTGGTCTTGGTGCTATGGTAATCAAGTGGCACAAGAGGCCACATGATTGGCAAAAGAAGAATAGCTTCTCTTCATGGTTACTCCCTCTACATGCTGGTGATACAAGCTTCATGAGCAGCAAGAACTCAATGGGGTCTCACAAGAGCAACTTTTACTCCTCAACTAGGGGTTTAGGTAGGTATTTCTCCTTTGCGGAATTACAGGAAGCAACCAAGAACTTCGATTCTAGTGCTATTATCGGTGTTGGAGGATTTGGCAATGTGTATTTGGGTATGATTGATGAGTTGACTCAGGTTGCAGTTAAGAGAGGAAATCCACAATCAGAACAAGGTATCAATGAGTTCCAGACCGAGATTCAAATGTTGTCGAAGCTTAGACATAGGCACTTGGTGTCATTGATAGGATACTGTGATGAGAATGATGAGATGATCTTGGTTTATGAGTACATGCCTAATGGACATTTTAGAGACCATCTTTATGGAAACAACTTGCCTTCACTTTCATGGAAGCAGAGGTTAGAGATATGCATTGGTGCAGCTCGTGGCCTTCACTACCTCCACACTGGCACCACACAAGGTATCATTCACCGCGATGTTAAGACAACAAATATTTTGCTTGATGAAAACTTCACCGCCAAGGTATCTGATTTCGGGCTTTCCAAGGATGCACCTATGGGCCAAGGTCATGTTAGTACTGCAGTGAAAGGTAGTTTTGGTTATCTGGACCCTGAGTACTTCAGGAGGCAACAATTAACCGATAAGTCGGATGTGTATTCATTTGGTGTGGTGTTACTTGAAGCACTTTGTGCAAGACCAGTAATTAGTCCTCAATTGCCAAGAGAACAAGTTAACTTGGCTGATTGGGCAATGCAATGGAAAAGAAAAGGATTGCTTGACAAAATCATTGACCCTCTTCTTGTTGGTTCGATCAATCCAGAATCGATGAAGAAGTTTGCTGAGGCTGCTGAGAAGTGTTTGGCTGAACATGGATCTGATAGGCCTACAATGGGTGATGTATTGTGGAACTTGGAGTACTCATTGCAACTTCAAGATGCTTTCACACAAGGAAAGGCTGAGGATGAGGCTGCTAAGTCTTCTAATGTTGTGACTGTGGTGCCTTCTCATTCTCCAACACCATCCACCACCTCAGACGATAATGGATCGGTACAAGTGCAGGCTACTACTACTGATGAACATTCTGGAACTGCAATGTTTTCTCAGTTTTCCAATCTTAATGGAAGGTGA 2529 0.4128 MAPTILLMIILFFSTSCNSTFTPKDNFLIDCGAQSVATLPDGRQFKSDQQANSFLKANDEYKVSNDDANDAINPIYKNARIFIHEAQYSFPLTQPGFHWVRLHFNPIKNNVFDLQKATFSVNTDKYVLLHTFNINNNNNNKNATSPILKEFLINVTQPKFTISFIPLKNSAAFINAIELVSAPDNLIFDNAATLFPVGQFSGLSNYAFQPVYRLNNGGPLITPSNDTLARIWESDEPFLTNKNLAKSTSVATKVIIFPADTPTISPLIAPQTVYASATEMGDAGINQPNFNVSWKFDVDTSFSYLVRLHFCDIVSKGLNELYFNVYVNAKMAIPNLDLSATTGALATPYYKDIVVNASLMSEGLTVQVGPTDAEGVNANAIMNGIEVLKISNSVDSLDGEFGVDGRKIGGSHRGAVAAVGFGMMFGAFVGLGAMVIKWHKRPHDWQKKNSFSSWLLPLHAGDTSFMSSKNSMGSHKSNFYSSTRGLGRYFSFAELQEATKNFDSSAIIGVGGFGNVYLGMIDELTQVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMPNGHFRDHLYGNNLPSLSWKQRLEICIGAARGLHYLHTGTTQGIIHRDVKTTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPVISPQLPREQVNLADWAMQWKRKGLLDKIIDPLLVGSINPESMKKFAEAAEKCLAEHGSDRPTMGDVLWNLEYSLQLQDAFTQGKAEDEAAKSSNVVTVVPSHSPTPSTTSDDNGSVQVQATTTDEHSGTAMFSQFSNLNGR 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0034 842 PANTHER BNAC03G60370D PROTEIN 13 827 - -
Lal21g0034 842 SUPERFAMILY Protein kinase-like (PK-like) 476 772 IPR011009 -
Lal21g0034 842 CDD STKc_IRAK 508 772 - -
Lal21g0034 842 Pfam Malectin-like domain 29 389 IPR024788 -
Lal21g0034 842 Gene3D Phosphorylase Kinase; domain 1 463 577 - -
Lal21g0034 842 ProSiteProfiles Protein kinase domain profile. 502 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0034 842 SMART serkin_6 502 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0034 842 Gene3D Transferase(Phosphotransferase) domain 1 578 798 - -
Lal21g0034 842 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Lal21g0034 842 Pfam Protein tyrosine and serine/threonine kinase 506 767 IPR001245 GO:0004672|GO:0006468
Lal21g0034 842 MobiDBLite consensus disorder prediction 792 842 - -
Lal21g0034 842 Gene3D - 208 392 - -
Lal21g0034 842 Gene3D - 26 183 - -
Lal21g0034 842 PANTHER OS07G0166700 PROTEIN 13 827 IPR045272 GO:0004714|GO:0006468
Lal21g0034 842 MobiDBLite consensus disorder prediction 795 842 - -
Lal21g0034 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0034 Lal-Chr21 298302 300830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0034 21 842 Receptor kinase-like Gene Family AT4G39110 68.106 0.0 1171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal21g0034 Malectin_like 9.3e-41 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0034 - - gmx:100790759 1352.42