Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal21g0006 | ATGGAGAGTTTGAGGAAATCGTTGAAATCATATGGTTCTCGCAAACATGTAAGAAAAATATCAGCAGGTGGTGGAAGTCAAGAATCTGTGTTTGAAGAGCTCCCCATCCTTCTCTCCCAACAATCTTGTTCTGTCACTATCAAAAGCGACGATGAGGATAACAATATGATGAGGGATAATAAGAATGACAACAATAACAATAATAACAAACAGAAAATAATGTCACCATCTAGCATTGGTGAAATGGCCCTTGATATGGATTTAAAAATGGATGAGCTCCCTCTCCATGATTCATCTAATAGTAATAGTAATAGTAATACTAATGCTAATAATGAAGGTCCTCCAACAACTAGTTACAAAACAGCAACACCTCAATATTCCCTAAAACGCCCTCCTCATCCTCACCATGATAGGAACACCTCCAACTCTGCATTGCTCCTCAAAACAAAAACAAGATCGAGATTGCTTGACCCTCAATTCTCTCAGCCTCAACAACAAGACTACTCCAATCCTATCCCAAAGTCCTCAGGCCAACTCTTCTCCACCTTCATTGGCACCAAGAAGGGTGACAACGATGATGAAGATGATCCTTTCTTAGAAGAAGATCTCCCAGATGAGTATAAGAATGAGACTCATTTCAGCCTCTGGGTTCTCCTCGAGTGGTTGAGTCTCATTTGCATCATCACCGCCTTTATCTCCACCCTCTGCATCCCTTCCTGGAGGGACAAGAATCTTTGGGACCTTAGGTTATGGAAATGGGAGGTCATGATTCTAGTCCTAATATGCGGTCGATTGGTCTCTGATTGGGTCATCCGCATTGTTGTCTTCTGCATAGAGAGGAATTTCGTGTTGCGCAAGAGAGTCTTGTATTTTGTCTATGGTGTCAGGAAGGCTGTACAGAATTGCTTGTGGTTGGGTCTTGTCTTGATTGCTTGGCACTTATTATTTGATAAGAGAGTGGAGAGGGAAACCCAAACTGAATTTCTAAAATATGTGACTAAGGTATTGGTGTGTTTCTTGGTGGCCACGCTTGTGTGGCTTCTCAAAACTCTGGGGGTGAAGGTGCTGGCTTCTTCATTTCATATGAGCACCTATTTTGATAGGATTCAGGAGTCATTGTTTAATCAATTCATAATAGAGACGCTATCAGGACCACCAACCATAGAGGATGAGAAGCTAGCTTCAGAGGTACAAAAGCTGCAGAATGCAGGGGTGGCCATACCACCAGACCTAAGGGCCTCTGCCTTCCCAACAATCAAGAGTGGAAGGGTCAACAAGAGTGGAGTGCTTAAAAGTGCAACATTTTCTCAACGTTATTCCACTAAGAAGGTAGCAATGGATGATAATGGGATAACTATTGATCATCTTCATAAGTTGAATCCAAAAAATGTGTCAGCTTGGAATATGAAAAGGCTAATCAATATGGTCCGACATGGGGCTCTTACTACCCTTGATGAGCAAATACTTGATGATTCTACACAAGGGGATGAGTCAGCCAAGCAGATTAGAAGTGAAAATGAGGCTAAAGCAGCAGCCAAGAAAATATTTCACAATGTTGCTAGGCCTGGTTCCAGGTACATATACCTTGAGGATTTAATGCATTTTATGCGAGAAGATGAAGCTTTCAAAACCATATATCTCTTTGAAGGAGCATCTGAAACCAGTAAAATCAGCAAATCAGCCTTGAAGAACTGGGTGGTGAATGCCTTCCGGGAGAGGAGAGCACTTGCATTGACATTGAATGATACCAAAACTGCAGTGATAAAACTCCATCGGATGCTGAATTTTATGGTGGCCATTATTGTAGTGATTATTTGGCTCTTAATATTGGAAATTGCCACCACCAAATTTATTGTGTTTGTAACCTCACAGGTTGTAGTGGTTGCATTTGTATTTGGAAATACCTGCAAAACCATATTTGAATCAATTATTTTCTTATTTGTCATGCATCCATTCGATGTGGGAGACAGGTGTGAAATTGACGGAGTCCAGATGGTTGTAGAAGAAATGAACATATTGACAACCATATTTCTAAGATTTGACAATCAAAAGATCATGTTCCCTAACAGTGTCCTAGCTACTAAGGCCATACATAATTACTATCGGAGTCCGGACATGGGAGATGCTCTTGAATTCTTTATACATGTCACTACCCCGGCTGAAAACGTTGCACTTCTGAAACAAAGAATAGCGAGTTATGTTGATAATAAGAAGGAACATTGGTATCCTTCACCTACGATAGTGTTCAAGGATCATGAAAGTTTAAACATGATAAGAGTGGCAGTTTGGCCAACTCATAGAATGAACTTCCAAGACATGGCAGAAAGATTTCTGAGGAGATCCCTTTTGATTGAAGAGATGGTCAAGATTTTCAAGGACCTTGACATTCAGTACCGTCTCTTGCCCATTGATATTAACATTAGAACCATGCCTACCACTTCTGATCGTCTTCCACCTAGTTGGTCCACAATCACAAGTTGA | 2481 | 0.4091 | MESLRKSLKSYGSRKHVRKISAGGGSQESVFEELPILLSQQSCSVTIKSDDEDNNMMRDNKNDNNNNNNKQKIMSPSSIGEMALDMDLKMDELPLHDSSNSNSNSNTNANNEGPPTTSYKTATPQYSLKRPPHPHHDRNTSNSALLLKTKTRSRLLDPQFSQPQQQDYSNPIPKSSGQLFSTFIGTKKGDNDDEDDPFLEEDLPDEYKNETHFSLWVLLEWLSLICIITAFISTLCIPSWRDKNLWDLRLWKWEVMILVLICGRLVSDWVIRIVVFCIERNFVLRKRVLYFVYGVRKAVQNCLWLGLVLIAWHLLFDKRVERETQTEFLKYVTKVLVCFLVATLVWLLKTLGVKVLASSFHMSTYFDRIQESLFNQFIIETLSGPPTIEDEKLASEVQKLQNAGVAIPPDLRASAFPTIKSGRVNKSGVLKSATFSQRYSTKKVAMDDNGITIDHLHKLNPKNVSAWNMKRLINMVRHGALTTLDEQILDDSTQGDESAKQIRSENEAKAAAKKIFHNVARPGSRYIYLEDLMHFMREDEAFKTIYLFEGASETSKISKSALKNWVVNAFRERRALALTLNDTKTAVIKLHRMLNFMVAIIVVIIWLLILEIATTKFIVFVTSQVVVVAFVFGNTCKTIFESIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTIFLRFDNQKIMFPNSVLATKAIHNYYRSPDMGDALEFFIHVTTPAENVALLKQRIASYVDNKKEHWYPSPTIVFKDHESLNMIRVAVWPTHRMNFQDMAERFLRRSLLIEEMVKIFKDLDIQYRLLPIDINIRTMPTTSDRLPPSWSTITS | 826 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal21g0006 | 826 | MobiDBLite | consensus disorder prediction | 93 | 144 | - | - | |
Lal21g0006 | 826 | Pfam | Mechanosensitive ion channel | 593 | 794 | IPR006685 | GO:0016020|GO:0055085 | |
Lal21g0006 | 826 | MobiDBLite | consensus disorder prediction | 95 | 125 | - | - | |
Lal21g0006 | 826 | PIRSF | Memb_At2g17000 | 3 | 826 | IPR016688 | - | |
Lal21g0006 | 826 | MobiDBLite | consensus disorder prediction | 60 | 75 | - | - | |
Lal21g0006 | 826 | Gene3D | - | 651 | 700 | IPR023408 | - | |
Lal21g0006 | 826 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 142 | 815 | IPR016688 | - | |
Lal21g0006 | 826 | SUPERFAMILY | Sm-like ribonucleoproteins | 641 | 700 | IPR010920 | - | |
Lal21g0006 | 826 | MobiDBLite | consensus disorder prediction | 47 | 75 | - | - | |
Lal21g0006 | 826 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Lal21g0006 | 826 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN | 142 | 815 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal21g0006 | Lal-Chr21 | 121633 | 124769 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal21g0006 | 80 | 826 | Mechanosensitive Ion Channel Family | AT1G78610 | 60.230 | 0.0 | 870 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal21g0006 | K22048 | - | gmx:102665658 | 1024.62 |