Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1231 ATGGAGGAAGAGTCTTGGGAAAATTTGCATCTTCATATGGAAATGAATCATGATGATGATATTTTCTTAGAAAAGTGCCACAATGAAGTAGATGATGAGTTCATTAGAGAAATCCTATTTGAACAACCACCCTTCTCTTTTGAAAATGAAACTAATCATTCCTCCTTTCTTAATAGTACCACCACCATCGCCGCCGCCGCCGATGGCAGTGTTATTCCACCCATAGTGATGAGTAATGAACATGATTGTGTCAAAAAACCTCATAACACTTTAACTACTCCAAGGACTTGTATTCTCTCTTTTGGTGACTCAACAATGAAACCTATTACACATGAACATCAAAATAATAATTATGAACTTTTATTAGGAAATGAGGAAAAACCTTCTAATAATGAAAATAATAAAAATAAAAGGAAATTAGGAGAATCTAGACCAAGAGAAAGGATGAATAAGAATCAAGTAATGGATCATATAATGGCAGAGAGGAAAAGGAGACAAGAATTGACTGAAAGGTTCATAGCACTTTCAGCAACTATTCCTGGTCTAAACAAGGTAATCATTTTAATTATTTAA 573 0.3368 MEEESWENLHLHMEMNHDDDIFLEKCHNEVDDEFIREILFEQPPFSFENETNHSSFLNSTTTIAAAADGSVIPPIVMSNEHDCVKKPHNTLTTPRTCILSFGDSTMKPITHEHQNNNYELLLGNEEKPSNNENNKNKRKLGESRPRERMNKNQVMDHIMAERKRRQELTERFIALSATIPGLNKVIILII 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1231 190 MobiDBLite consensus disorder prediction 123 153 - -
Lal20g1231 190 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 152 190 IPR011598 GO:0046983
Lal20g1231 190 PANTHER BHLH TRANSCRIPTION FACTOR 5 184 - -
Lal20g1231 190 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 145 187 IPR036638 GO:0046983
Lal20g1231 190 MobiDBLite consensus disorder prediction 130 153 - -
Lal20g1231 190 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 5 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1231 Lal-Chr20 16760240 16766251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1231 86 185 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.538 1.46e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1231 - - gmx:100778376 130.954