Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1197 ATGACGTCAACAACAACAACCACAACCACCACAACACCCCTCCTCCGCCACCAGACCCCACGGTGGTTCCCCTCCACCATAAAACTGAAAACCACCCTCTCCTCAGAACTCTCCGGCGCCGTCGGAGACTTAGGAACCTACATCCCAATAGTGTTAGCTCTCTCTCTAGTTAACAACCTTAACCTAACAACAACTCTCATCTTCACTGCACTCTACAACATCGTCACTGGTCTCCTCTTCGGTCTACCCATGCCAGTTCAGCCCATGAAATCCATCGCCGCCGTCGCCATATCCGAATCGCCGCCACTAACTATTCCTCAAATATCAGCGGCGGGTCTCTCCGTCGCCGCCGTGCTACTTGTTCTTGGTTCGACTGGACTTATGTCGTTTCTGTATAAATATCTTCCTCTTCCGGTTGTTCGTGGCGTTCAACTTTCTCAGGGGCTTTCGTTTTCTTTCTCTGCCATTAAATATATTCGGTTTCAACAGAATTTGGCTACGTCTAAATCTGGTGATCAGAGACCGTGGATTGGACTTGATGGCCTCATCGTCGCTCTCGCCGCTCTCTGTTTTCTCCTACTTACCACCGGTGCCGGCGTTGATCATCTTTCTCAACAACAAGAACAAGAACAACAAGGTGTTAATGATAGGAAGAACAGGGTTGGACATAGATTGAAGATTTTGTCAGCTATTCCTTCAGCTCTAATAGTTTTCTTGTTTGGCTTGTTGATTTGTTTTCTTCGTGACCCTTCAATATTCAAGGATCTAAAGTTTGGTCCTTCGAAAATTTCGGTTGTGCCCATTACCTGGGAGGATTTAAAGATTGGATTTTTACGTGCAGCAATTCCACAAATCCCTTTATCTATTTTGAATTCAGTTATTGCAGTTTGCAAGTTATCAGGGGACTTGTTTCCTGACAAAGAAGCTTCGGCGATGAAGGTTTCGGTGAGTGTCGGTGTAATGAACTTTGTAGGGTGTTGGTTTGGTGCTATGCCATGTTGCCATGGTGCTGGTGGTTTAGCAGGACAATATAGATTTGGTGGTAGGAGTGGTGCTTCTGTTGTGTTCCTTGGTGTTGGTAAATTGGTTCTTGCTTTGATTTTTGGTAACTCTTTTGGAAGGATTTTGGGTCAGTTTCCAATTGGGATTCTTGGGGTACTTTTGTTGTTTGCTGGGATTGAATTAGCAATGGCTTCTAAAGACATGAAAACAAAACAAGAGTCATTTGTTATGTTTGTTTGTGCTGCTGTTTCTCTCACTGGTTCTAGTGCTGCACTTGGGTTTTTTGTTGGCATTGTGCTTTATTTGTTGCTCAAATTGAGGGAGCTTGATTTTGATTCTTTTTTTGGGCTTGGAACTTCCAACAATATCAAATCTTCTTTAGATGAGGAAAGTAGCTTAATTGGCTAG 1410 0.4397 MTSTTTTTTTTTPLLRHQTPRWFPSTIKLKTTLSSELSGAVGDLGTYIPIVLALSLVNNLNLTTTLIFTALYNIVTGLLFGLPMPVQPMKSIAAVAISESPPLTIPQISAAGLSVAAVLLVLGSTGLMSFLYKYLPLPVVRGVQLSQGLSFSFSAIKYIRFQQNLATSKSGDQRPWIGLDGLIVALAALCFLLLTTGAGVDHLSQQQEQEQQGVNDRKNRVGHRLKILSAIPSALIVFLFGLLICFLRDPSIFKDLKFGPSKISVVPITWEDLKIGFLRAAIPQIPLSILNSVIAVCKLSGDLFPDKEASAMKVSVSVGVMNFVGCWFGAMPCCHGAGGLAGQYRFGGRSGASVVFLGVGKLVLALIFGNSFGRILGQFPIGILGVLLLFAGIELAMASKDMKTKQESFVMFVCAAVSLTGSSAALGFFVGIVLYLLLKLRELDFDSFFGLGTSNNIKSSLDEESSLIG 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1197 469 Pfam Molybdate transporter of MFS superfamily 36 151 IPR031563 GO:0015098|GO:0015689
Lal20g1197 469 Pfam Molybdate transporter of MFS superfamily 277 395 IPR031563 GO:0015098|GO:0015689
Lal20g1197 469 PANTHER MOLYBDATE TRANSPORTER 2 6 462 - -
Lal20g1197 469 PANTHER - 6 462 IPR031563 GO:0015098|GO:0015689
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1197 Lal-Chr20 16463318 16466425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1197 9 466 Inorganic Solute Cotransporters AT1G80310 68.330 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1197 - - gmx:100776620 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1197 20 16463318 16466425 Lal20g1197 20 16463318 16466425 ECH