Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1188 ATGTCTGCTTCATTAGTAAATAAAAGTGTGTTATTTATCATAGTAACAATATTTGTTACATTACAATTGATGGTTGGTGTGGTGTCTGGATCTTTCCTTGATACAGATGTTACATTTTCCAACTCCTTATTAGTTCCTATCACAATTCATTGCCAAGACAAGAATCATGATGATGGTGATTTTCTTACTGTAAAGTTTACGCGTGACTTCCTTACACGTACGTTAAGGGTTTGCAGTTTTAAATGGGAAAAAGAAATTCACTATATTGATATTTATGTTCAAAAGAGACATAGTTGCAACGAATGTCGCTGGATGATAAGAACAAATGGATTGTGTTTAAATATATTTCCAGATATACAATGTTATCCATGGAATGATAAAGTTCTTGAAGCACTTAAGTAA 402 0.3184 MSASLVNKSVLFIIVTIFVTLQLMVGVVSGSFLDTDVTFSNSLLVPITIHCQDKNHDDGDFLTVKFTRDFLTRTLRVCSFKWEKEIHYIDIYVQKRHSCNECRWMIRTNGLCLNIFPDIQCYPWNDKVLEALK 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1188 133 PANTHER - 10 122 IPR010264 -
Lal20g1188 133 Pfam Plant self-incompatibility protein S1 39 124 IPR010264 -
Lal20g1188 133 PANTHER S-PROTEIN HOMOLOG 2 10 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1188 Lal-Chr20 16324922 16325344 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1188 45 129 Carbohydrate Esterase AT3G16970 35.922 2.82e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1188 - - lang:109347126 95.5153