Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1178 ATGATGGAAGTACATAATGGTAATGGTAGTAGTAACATGAACAGTATGAATGATGAAAGTTTAATGTTGAATCTGACACCAGTTGCACCAGAACAAAGTGGAAAAGGGTTACCATATGCACCAGAAAATTGGCCTGAAGAAGGAGATATATGGGGTTGGAGAACTGGTAAAAGGGTTTCTGTAACAACTGGTTTCTTTAATGATAGATATCTTTATCCACCAACTCGTCTTGGTCGTCCTCTATGTTCTAAACCTGGCTTCCCAAGCAAGTTATCTGTTGAACGTTACATCAATGATAATTTCCCTCACCTTGATCTTAATCACTTCTTTGCTTCTTTCAGTTGGAAGATTCCTGCTTTACTTTCTGGCAATGAGGATCCAATAACTACTGTACCTATTAAAAAATTTAAACAACAATCAGATCCTTTTGATTCTGTTGTGTGTAAAGCTAGGAATCAATGTTGTATTAGCCTGAATTTGGAAAAGAAGAAATATCAATCAGCTATGCCCTGTGATATATGTTGTGTCGAACCTGGTTTTTGTCGCGATTGCTGCTGTATTCTTTGTTGCAAAACTGTCGATTCGGCTTATGATGACTACAGTTACATCAAGTGCCAAGTAAAGTTTGGTGATGATATATGTGGCCACATTGCTCATATGGAATGTGCTCTCCGAGCTCGAATGGCTGGCACAATTGGAGGAAGTATTGGATTGGATGCTGAGTACTATTGCCGCCGTTGTGATGGCAAGACTGATATGATTTCTCATGTCAATAAGGTTGCACAAATTTGCAGATCGATTGATTTGGATTATGACATCGAAGAAAAGATTTTATATCTTGGTGTCTGTCTCTTACGCGATTCACAGAAAGCCAGTGCAAAGAAGCTTGTTAGACATCTTGAATTGTCCATCTCAAAGCTTAAATGTGAGGGTGAGACCATTCCCGAAGACAACGACAACGCCGATGATGATAGCTATAGTCCTACACCTCAGTCTGCAGGCTTCTCGGACAATAGCGATGTTGCGAACGATGTTACGATCAATGAAAGAACCGATGTTAGAACGATGATTGAATCTTTTGGTTCAATGTCTAATTCATTAAAACTAGAGGTTGAGGTTGACAAGGTTCTCGAGGCTCTAAGAAAGTCACAGCAATATGAATATAATCTTGCAGAAGAAAGACTCATTGCACATAAGAATTATTTACAAAATTTGTATCAGCAAGTGGAATATGAGGAGCTTGAATTAGCATCTAAAAAACACTCATATGCTGTTATCTCAGAAAGAAGGGTTCAGATAAAGAAGGAAGTCATGAAATTTGAAGATATGAAAAAGATAGCCAATGGGTTTGGCAAGACATCTAAGGATATTTTAAGGGACAATTTTGGTTTAGAAATTGATCATTAA 1407 0.3795 MMEVHNGNGSSNMNSMNDESLMLNLTPVAPEQSGKGLPYAPENWPEEGDIWGWRTGKRVSVTTGFFNDRYLYPPTRLGRPLCSKPGFPSKLSVERYINDNFPHLDLNHFFASFSWKIPALLSGNEDPITTVPIKKFKQQSDPFDSVVCKARNQCCISLNLEKKKYQSAMPCDICCVEPGFCRDCCCILCCKTVDSAYDDYSYIKCQVKFGDDICGHIAHMECALRARMAGTIGGSIGLDAEYYCRRCDGKTDMISHVNKVAQICRSIDLDYDIEEKILYLGVCLLRDSQKASAKKLVRHLELSISKLKCEGETIPEDNDNADDDSYSPTPQSAGFSDNSDVANDVTINERTDVRTMIESFGSMSNSLKLEVEVDKVLEALRKSQQYEYNLAEERLIAHKNYLQNLYQQVEYEELELASKKHSYAVISERRVQIKKEVMKFEDMKKIANGFGKTSKDILRDNFGLEIDH 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1178 468 MobiDBLite consensus disorder prediction 313 340 - -
Lal20g1178 468 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 6 467 - -
Lal20g1178 468 MobiDBLite consensus disorder prediction 324 340 - -
Lal20g1178 468 Pfam PHD - plant homeodomain finger protein 151 274 IPR032881 -
Lal20g1178 468 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 6 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1178 Lal-Chr20 16222426 16225206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1178 166 315 PHD Gene Family AT5G57380 31.818 8.09e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1178 - - gmx:100818560 488.419