Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1177 ATGGCTGCTTTGTTAGTAAACAAAATTGTGCTATTAATCACAGTAACAATATTTGTTACATTACAAGCGATGGTTGGTGTGGTTTATGGTGCTCTCTTTGATACAAGGGTTACAATGATCAACGACATTTTACATCCTGTCACAATTCATTGCAAAGACAAGAATCATGATGATGGTTTTCATATTTTGAAACCAGGTGATATTCATAGTATTAATTTTAAACGTGCTTTTATAATACCCCGCGCATTATGGTTTTGTAGCTTTAAGTGGGAAGGAGAATTTCACTATTTTGACATTTATGTTCAAAAGAGAGATAGTTGCACTCACTGCTACTGGAGAATACAGGAAAAAGCAATGTGTAGGACAAATCCAATAAACAATGAAAACATTCAACTTCCTAAAGCCCTACCGTGTTATGCATGGAATAAGAATATTAATGTTACACCATCACAAAAAGGGAACAATAATACAGATCTTGAAGCCCTTAAGTAA 492 0.3394 MAALLVNKIVLLITVTIFVTLQAMVGVVYGALFDTRVTMINDILHPVTIHCKDKNHDDGFHILKPGDIHSINFKRAFIIPRALWFCSFKWEGEFHYFDIYVQKRDSCTHCYWRIQEKAMCRTNPINNENIQLPKALPCYAWNKNINVTPSQKGNNNTDLEALK 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1177 163 Pfam Plant self-incompatibility protein S1 37 125 IPR010264 -
Lal20g1177 163 PANTHER S-PROTEIN HOMOLOG 18-RELATED 9 139 - -
Lal20g1177 163 PANTHER - 9 139 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1177 Lal-Chr20 16196696 16197187 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1177 11 127 Carbohydrate Esterase AT3G16970 32.031 4.01e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1177 - - lang:109347126 119.398