Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1171 ATGAAGAAACAAGGGCAGCGATCTTCTGCGGCGGGGTTCCACCATAACAACAACTACTCCGATAAATTCTTCGATGCTTCGTCCAATAACAACTGGTTTCACTCTTCTTCTAATCCTATTCCTCCTCTTCAGGACTACAACTTGTATGGTGGGGGAGGTAGAATGTATAAGAATGTACAGAGGAGCTTCAGTGGAGGAAATGAGTATTACATGGAGCAATCTACACCGATGAAGAAATACGGAGAAGAAGATTCACCCAGTGATTTCAGCCCTGGCCTCTTGGATCTCCATTCATTTGATACCGAGCTTCTTCCCGAGATGCCGGTGTCCAATGTATTTGATGCCACCCTCAGTAGAAGCTTGGATGATTCTGAACCTTACATTTATAGCAAACAAATTGGCAGAGGGCTTGCACCTGAAAACGTCTCGAATAATATTTCTGCAGACAAAGAGAAATCTAGTTCTGTAGCAAAGATTAAAGTTGTGGTTCGCAAAAGACCCCTTAATAAGAAGGAAGCGACAAGGCGTGAGGAAGATATTGTAGATACAGTTTCCAATTATTTAACAGTGCATGAGACTAAACTTAAGGTTGACCTAACTCAGTATGTTGAGAAGCATGAATTTGTTTTTGATGCTGTCTTGAATGAAGAAGTTACGAACGATGAGGTGTATCGTGAAACAGTGGAGCCCATAGTTCCAATAATCTTTCAGCGCACTAAGGCAACTTGCTTTGCATATGGACAAACAGGAAGTGGAAAAACGTACACAATGAAGCCACTGCCTCTTAAGGCATCAAGGGACATATTGACACTGATGCATCATACTCACAGGAACCAGGGTTTTCAGTTGTTTGTGAGTTTCTTTGAAATATATGGTGGGAAGCTTTTTGATCTCCTTAATGATCGAAAAAAACTATGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTCGGTTTGCAAGAGTACCGGGTATCGGATGTAGAGACCATCAAGGAACTAATTGAGCAAGGTAATGCCACAAGAAGTACTGGCACCACGGGTGCCAATGAGGAATCTTCACGGTCACATGCAATACTTCAGCTTGCTGTCAAGAGACCAGCTGATGGCAATGTATCCAAGCCTCCCCGTCTTGTTGGCAAGCTATCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCGGATACCACAGACAATGACAAGCAGACAAGAATAGAAGGTGCTGAGATCAATAAGAGCTTGCTGGCCCTTAAGGAATGCATAAGAGCTCTCGATAATGACCAGGGACACATCCCGTTCAGAGGCAGTAAACTGACCGAAGTTTTGAGGGATTCATTTGTGGGCAATTCCCGCACTGTTATGATATCATGCATATCACCAAGCTCTGGTTCATGTGAACATACTCTCAATACATTAAGATATGCTGACAGGGTAAAAAGCCTTTCAAAAGGGAACAATTCTAAGAAAGATGCTCCATCTTCAAATTTCAACCTTAGAGAATCAACTACCATCCCATTATCTTCGGTTGCTGCATCTGCTTATGCGGATCGCACAGCTGATACTTGGCTTGAAGAAAATGACGGGGATGAATTTAGTCCCCCTGAAGAGTATTATGAACATCTGAAACCATCATTAAAGAAAAATGGAAAGATAGAGCTATATGGTGCGGCAGATGACAAGTTGAAGAAACCCAATGGTCAGATCAAATGGAAGGACCCCGCAAAAGTTGAACCTGTAACCACACATTTAGATGATGATTTAAATGCGCTTTTACAGGAAGAAGAAGACCTCGTAAATGCTCACCGGAAACAAGTAGAGGACACCATGAATATTGTCAGAGAGGAAATGAACCTCTTGGTTGAAGCAGATCAACCAGGGAATCAGCTGGATGATTATTTAACAAAACTAAACGACATTCTATCTCAGAAGGCGGCGGGCATCGTGCAGTTACAAACTCGATTAGCGCATTTCCAGGAACGCTTAAAGGAGCATAATGTTATGACTAATTCACTTCAATATGATTTCTACCGTGATTCATGCCCTCATGCTGAGCGCATTGTTCGCGCTGCGATTCGTCAGCTTCATCGCTCTAGACCTAGTTTGATTCCTGCTATCATTCGTCTTGCTTTTCATGATTGCTTCATTCAGGGATGTGATGCTTCAGTTTTGTTGGATGCTGATGATTACATTGATTCAGAGAAAGAGTCACCTCCCAATCAAAGTCTCAAAGGTTTTGATGTAATCGAGACCATCAAGTTCGAGCTCGAAGAAGCATGTCCCGGGGTTGTTTCCTGTGCCGATATTCTTGTACTGGCAGCAAGAGACTGTGTAGCTCTGGCTGGCGGTCCATTTTATCCATTAAACACAGGCAGGAGAGATGGTTCCAACTCGTTTGCTGACATTGCAACCTTCGAGCTTCCTTCACCGTATGGTGATTTATCGGATACCATTGCATCCTTCAAAACAAGGGGGTTCAATGAAAGAGAGATGGTCACTCTCCTAGGTTCTCACAGCATTGGTGTAATCCACTGCAAATTCTTCCAAGACCGTCTCTATAACTTCGCTGGAACTAATGAACCTGACCCTTCTCTAGATACTGAATTTCTAAAGCTACTAAGATCAAGATGCAATCATACTAATGCATTGTCCTCTTCAGCATTAGTTGAAGAGCCAGGAGTGGATATGGACTTTGAGCAAACTCGGTCGGATTTTGGGATGGTATACTACCATAGCCTGTTGCACGGTAGAGGAGTCCTTTATGCTGATCAGCAGCTAATGAAAGGGAAAGCAACCAAAAAATGGATTAAAGCGTATGCATATGATCCTACTTTGTTCCATAGACACTTCGCCCTGGCAATGATGAAACTCTCGGATCTTCGTGTCTTGACACTTCCTATGGGCCAGATTCGGCGCAAGTGTTCAAAGATTGCATGA 2934 0.4315 MKKQGQRSSAAGFHHNNNYSDKFFDASSNNNWFHSSSNPIPPLQDYNLYGGGGRMYKNVQRSFSGGNEYYMEQSTPMKKYGEEDSPSDFSPGLLDLHSFDTELLPEMPVSNVFDATLSRSLDDSEPYIYSKQIGRGLAPENVSNNISADKEKSSSVAKIKVVVRKRPLNKKEATRREEDIVDTVSNYLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILTLMHHTHRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVETIKELIEQGNATRSTGTTGANEESSRSHAILQLAVKRPADGNVSKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDAPSSNFNLRESTTIPLSSVAASAYADRTADTWLEENDGDEFSPPEEYYEHLKPSLKKNGKIELYGAADDKLKKPNGQIKWKDPAKVEPVTTHLDDDLNALLQEEEDLVNAHRKQVEDTMNIVREEMNLLVEADQPGNQLDDYLTKLNDILSQKAAGIVQLQTRLAHFQERLKEHNVMTNSLQYDFYRDSCPHAERIVRAAIRQLHRSRPSLIPAIIRLAFHDCFIQGCDASVLLDADDYIDSEKESPPNQSLKGFDVIETIKFELEEACPGVVSCADILVLAARDCVALAGGPFYPLNTGRRDGSNSFADIATFELPSPYGDLSDTIASFKTRGFNEREMVTLLGSHSIGVIHCKFFQDRLYNFAGTNEPDPSLDTEFLKLLRSRCNHTNALSSSALVEEPGVDMDFEQTRSDFGMVYYHSLLHGRGVLYADQQLMKGKATKKWIKAYAYDPTLFHRHFALAMMKLSDLRVLTLPMGQIRRKCSKIA 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1171 977 PRINTS Haem peroxidase superfamily signature 702 716 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal20g1171 977 PRINTS Haem peroxidase superfamily signature 763 780 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal20g1171 977 PRINTS Haem peroxidase superfamily signature 781 793 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal20g1171 977 PRINTS Haem peroxidase superfamily signature 829 844 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal20g1171 977 ProSiteProfiles Plant heme peroxidase family profile. 670 977 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal20g1171 977 Coils Coil 976 977 - -
Lal20g1171 977 PRINTS Plant peroxidase signature 680 699 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g1171 977 PRINTS Plant peroxidase signature 704 724 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g1171 977 PRINTS Plant peroxidase signature 743 756 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g1171 977 PRINTS Plant peroxidase signature 762 772 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g1171 977 PRINTS Plant peroxidase signature 781 796 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g1171 977 PRINTS Plant peroxidase signature 828 840 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g1171 977 PRINTS Plant peroxidase signature 911 928 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g1171 977 PRINTS Plant peroxidase signature 951 964 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g1171 977 ProSiteProfiles Kinesin motor domain profile. 158 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal20g1171 977 Coils Coil 647 667 - -
Lal20g1171 977 Coils Coil 591 611 - -
Lal20g1171 977 SMART kinesin_4 156 487 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal20g1171 977 Pfam Peroxidase 687 940 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal20g1171 977 ProSitePatterns Peroxidases proximal heme-ligand signature. 829 839 IPR019793 -
Lal20g1171 977 Pfam Kinesin motor domain 164 480 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal20g1171 977 Gene3D Kinesin motor domain 138 484 IPR036961 -
Lal20g1171 977 PANTHER KINESIN-RELATED PROTEIN 6 2 671 - -
Lal20g1171 977 Gene3D Peroxidase, domain 2 807 956 - -
Lal20g1171 977 PANTHER KINESIN-LIKE PROTEIN KIN-13B 2 671 - -
Lal20g1171 977 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 481 IPR027417 -
Lal20g1171 977 SUPERFAMILY Heme-dependent peroxidases 671 976 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal20g1171 977 CDD KISc_KIF2_like 158 479 - -
Lal20g1171 977 ProSitePatterns Kinesin motor domain signature. 380 391 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal20g1171 977 Gene3D - 674 975 - -
Lal20g1171 977 CDD secretory_peroxidase 671 976 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1171 Lal-Chr20 16149809 16161620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1171 671 975 Peroxidase AT4G33870 50.000 1.58e-111 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1171 K10393 - gmx:100810966 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1171 20 16149809 16161620 Lal20g1171 20 16149809 16161620 ECH