Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1169 ATGGGTAAGGGTACTGGGAGTTTCGGTAAGAGAAGGAACAAGACACACACACTATGTGTGAGGTGTGGTCGACGCAGCTTTCACCTTCAGAAGAGTCGTTGTTCCGCTTGTGCTTACCCTGCTGCACGTGTCAGAAAGTATAACTGGAGTGAGAAGGCAATTAGGAGAAAGACCACTGGTACTGGTAGGATGAGGTACTTGCGTCATGTGCCTCGCAGGTTCAAGTCTGGCTTCAGAGAAGGCACTGAAGCTGCACCTAGGAAGAAGGGAGCAGCTGCATCTGCATAA 288 0.5035 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSEKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKKGAAASA 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1169 95 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Lal20g1169 95 Hamap 50S ribosomal protein L37e [rpl37e]. 2 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Lal20g1169 95 PANTHER 60S RIBOSOMAL PROTEIN L37 1 95 - -
Lal20g1169 95 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Lal20g1169 95 PANTHER RIBOSOMAL PROTEIN L37 1 95 - -
Lal20g1169 95 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Lal20g1169 95 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1169 Lal-Chr20 16139119 16141403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1169 1 95 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 87.368 3.85e-57 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1169 K02922 - han:110904592 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1169 20 16139119 16141403 Lal20g1169 20 16139119 16141403 ECH