Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1114 GGTTTCAGCATAAATCACTATATAAAGCATGAAAGGAACCCTATTTGTTCACAGTTTCTGCAGCTGGAGAAGAAAATGGCGACAGTACCAGGCCAACTTGTGTGGGAGATTGTGAAGAGAAACAATTCCTTTTTGGTTAAACAATTTGGAAGAGGTTCTCAGAGTATTGAATTCAGCAAAGAACCCAACAATCTCTACAACCTCAATTCCTACAAATACTCCGGATTGGCTAACAAGAAAACTGTTACCATTCAAGCTAATGGTAAAGATCAAGGTGTGTTGTTGGCTACAACTAAGACTAAGAAGCAAAACAAGCCTTCTGCATCGGTTCATAAATCTGTTTTGAAAAAGGAGTTCCGGAGAATTGCTAAGGCCGTGAAAAATCAGGTGGCAGATAACCACTACAGACCTGATCTGAAGAAGGCAGCCCTTGCAAGGTTGAGTGTTGTTCACAAAAGCCTCAAAGTTGCCAAGTCTGGTGCTAAGAAGAGGAACAGACAAGGTGCAAGGAAGTGA 516 0.4147 GFSINHYIKHERNPICSQFLQLEKKMATVPGQLVWEIVKRNNSFLVKQFGRGSQSIEFSKEPNNLYNLNSYKYSGLANKKTVTIQANGKDQGVLLATTKTKKQNKPSASVHKSVLKKEFRRIAKAVKNQVADNHYRPDLKKAALARLSVVHKSLKVAKSGAKKRNRQGARK 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1114 171 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 26 168 - -
Lal20g1114 171 PANTHER 60S RIBOSOMAL PROTEIN L28 26 168 IPR002672 GO:0003735|GO:0005840|GO:0006412
Lal20g1114 171 Pfam Ribosomal L28e protein family 33 153 IPR029004 -
Lal20g1114 171 Gene3D - 31 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1114 Lal-Chr20 15368591 15371648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1114 26 168 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 76.224 4.05e-78 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1114 K02903 - gmx:100499921 243.047