Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1099 ATGATGAATAAGAATAAGGATCATGATAAGAAGAACAAGAAGCCTCGACTTGCTTGGTCAGTGGAATTGCACCGCAAGTTTGTTCATGTTGTTAATCTTTTAGGAATTGAGAATGTTGTACCTAGAAAAATTGTCGCGTTGATGAATGATGAAAGACTTACAAAGGAGAATGTGGCCAGTCATCTTCAGAAATATAAACTTTTTCTCAAAAGAATTAGCAGCAACTGTGTGGCAAGTGGAAATGGTTCTATAATTGGTTGTGGACAATTTCAGAATGTTTCTCCAAGTGATCCTGTGTATCAGAACGATGCTGTTCAAGAAATGCCGATGCCAACATGGCATTCCGACGAAAGCCTTGATTCGTTGATCGATGATGTGTTTCTACAATGGTGGGAAGACCATAATAAGGACGCAACTGACCTTTCAAATGTTATTGGTACCTCACCAAACACACTGACTTCGTTGAAGGATGTTGTTAATAATAATCTTGGTTCACCAGAAAACTTGGTTACTGTTGCATCTCCCAGCTGCATCTCCCACGAGTCGATCGAGATTGGAGAGCTGAGACAAGAGATTGCTGCAACCAGAAATGAGACTCATCAATTAAGGGAGACGATCCAAGCATTGAAGGCACAACATGACATGTTGGTGCAAGTTGTTCTACAGCTTCTCCCACCCAATGTGGTAATGCAACAATAG 699 0.4077 MMNKNKDHDKKNKKPRLAWSVELHRKFVHVVNLLGIENVVPRKIVALMNDERLTKENVASHLQKYKLFLKRISSNCVASGNGSIIGCGQFQNVSPSDPVYQNDAVQEMPMPTWHSDESLDSLIDDVFLQWWEDHNKDATDLSNVIGTSPNTLTSLKDVVNNNLGSPENLVTVASPSCISHESIEIGELRQEIAATRNETHQLRETIQALKAQHDMLVQVVLQLLPPNVVMQQ 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1099 232 Coils Coil 178 212 - -
Lal20g1099 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 177 IPR045279 GO:0009736
Lal20g1099 232 SUPERFAMILY Homeodomain-like 13 71 IPR009057 -
Lal20g1099 232 Pfam Myb-like DNA-binding domain 17 66 IPR001005 -
Lal20g1099 232 Gene3D - 10 73 - -
Lal20g1099 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 177 - -
Lal20g1099 232 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 14 67 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1099 Lal-Chr20 15157455 15159328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1099 5 81 Response Regulator Gene Family AT3G16857 56.410 1.14e-22 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal20g1099 Myb_DNA-binding 5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1099 - K14491 lang:109344458 332.413