Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1089 ATGAATAATAACAACAACACCAACAACAACCTAAGAAATGGTAACAACACAACCCAGGCTTGTGCTGCATGCAAATACCAACGTAGGAAATGTGCACCTGATTGCATTCTTGCACCATATTTCCCTCATGATCGCCAAAGACAATTCCTTAATGCCCATAAATTATTTGGTGTTAGCAACATAACCAAGATTATCAAGTTTGTCGAACCACACGAAAAGGATCAAGCGATGCGTACGATTATCTATCAATCCGATATGCGCGCTAACGACCCCGTTGGAGGTTGTTATAGGTACATCCAAGACCTTCATAATCAAATCGAGTATCATCGCGCTGAACTTGAATTAGTCCTCCAAAATCTCGCAATTTTCCGAGCGCAACATCACCAACAACAACATCAACATGCTCAACATGTTTACAATCCAACGTTAACTAATGTTAATGTTGGTATGATTGGAGAGGATTTTATGAGTGCAGGTGAATTAGGTGATCCTTTGAGCCTGTATAATTCGGCTTCGGCGCAGAATCATTACCATTATTTTCAACAAGATCCACAACATGAGCAATACATTATGTTACCAGAGAGTAATGAGAACAATTGCAGTAATAACAATAACAATACTATGTTGCAAGATCAAGTTAATTCATGGGCTATGCAGAATTCCATGTCCCTTTCGTCTTTGTCATTGCAAGGACAAAGTAGTAATGCTAGTCTTGGTGATGAATATGATCATAGATCAATGCTTGAGATGCCTTCTGAAGAACGAAATGAGATCGGATTCGAGGTCGGAGATCTAGTTCATCACAGTGATGATGCAGTTTTGTATAAGATAGATGAATCAGTAATAAATGCAAATGCTGATAGCATTCAACAAACTCAAGATCATGATCTGAAAGGTGCAGCAACTTTGTTTACTCTCACAAATTGTAATAGTTGA 936 0.3846 MNNNNNTNNNLRNGNNTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKFVEPHEKDQAMRTIIYQSDMRANDPVGGCYRYIQDLHNQIEYHRAELELVLQNLAIFRAQHHQQQHQHAQHVYNPTLTNVNVGMIGEDFMSAGELGDPLSLYNSASAQNHYHYFQQDPQHEQYIMLPESNENNCSNNNNNTMLQDQVNSWAMQNSMSLSSLSLQGQSSNASLGDEYDHRSMLEMPSEERNEIGFEVGDLVHHSDDAVLYKIDESVINANADSIQQTQDHDLKGAATLFTLTNCNS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1089 311 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 14 233 - -
Lal20g1089 311 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 14 233 - -
Lal20g1089 311 Pfam Lateral organ boundaries (LOB) domain 20 115 IPR004883 -
Lal20g1089 311 ProSiteProfiles LOB domain profile. 19 120 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1089 Lal-Chr20 15041853 15043593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1089 19 258 AS2 family AT3G13850 47.521 2.66e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal20g1089 LOB 2.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1089 - - pvu:PHAVU_010G138500g 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1089 20 15041853 15043593 Lal18g0144 18 1144145 1145378 LSH