Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1064 ATGGCACGGGGGAGAATAAGGGCAAGGCTCCGCAGGAGCAATCTTTACACATTCAGTTGTCTTCGGCCTTCTACGACCGAGGAGGCACCTCATCCTCTTCAAGGTCCTGGCTTTTCGCGAACTGTGCATTGCAACCAGCCTCTGCTCCATGAAAGGAAACCTCTATTTTACTGCAGGAATGATATATCCACAACGAAATACAATGTTATTACGTTTTTGCCCAAGGCGCTTTTTGAACAATTTCGAAGGGTAGCTAATATATACTTCCTTTTAGCTGCATGCCTCTCAGTCACTTCGATGTCACCTTTCAGTCCGCTAAGCATGATTGCTCCTTTGGCTTTTGTTGTGGGGCTTAGTATGGCAAAGGAAGCATTGGAAGATTCGCGAAGGTTGGTTCAGGATGTCAAAGTTAATCGCCGGAAAGTTAATCAGCATAAAGGCAATGGTGATTTTGGTCCAAGGTCGTGGCAGAAAATTATGGTTGGGGATGTGGTAAAAGTAGAAAAAGATCAATTTTTTCCAGCTGATCTGCTTCTCTTGTCGACAAGTTATGAGGATGGGATATGCTATGTGGAGACGATGAATTTAGATGGTGAGACCAACTTGAAGGTCAAAAGATCTTTGGAGGCTACCTTAACTCTGGATAATGATGGAGCTTTTAAGGATTTCACAGGAACAATACGTTGTGAAGACCCAAACTCCAGTCTTTACACCTTTGTTGGAAACTTAGAGTATGAACGCCTAGTTTATCCTCTTGATCCTAGTCAAATTCTCCTCAGAGATTCTAAGCTCCGGAACACTGATTACATCTATGGGGTGGCCATTTTCACTGGTCATGATAGCAAAGTCATGCAAAATTCCACAAGATCCCCTTCAAAAAGGAGCACAATAGAGAAGAAGATGGATTATATTATATACACTCTCTTCACTGTCCTTATTTTTATATCCGTTGTTAGTTCCATAGGATTTGTCGTAAAGACTAAGTACCAAACCACAAAATGGTGGTACTTACGGCCTGACCGCATTGATAAGCAGTATGATCCAAAGGAAATTGGAACGGCTGGGATGAGTCATCTGATTACTGCACTCATTCTCTATGGATATTTGATACCCATATCTCTTTATGTTTCGATTGAGGTCGTGAAGGTTTTACAAGCAACCTTTATCAACCAAGACATTCAAATGTATGACGAAGAAACTGGGACTCCAGCTGATGCACGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTGGACACCATCCTCTCTGATAAAACTGGAACTTTAACTTGCAATCAGATGGACTTCTTGAAGTGTTCCATTGCTGGTACTGCATATGGTGTGCGTTCCAGTGATGTTGAAGTTGCTGCAGCAAAGCAGATGGCTTCTGATCTTGAGGATGATGATTCAGATCTCTCCAATTTCCCCATGCCCAAGACTAAAGTTTCATGGGAAGATGTTAGAAGAGCTGAAGAAATTGAACTCGAGTCTGTTGTTACTTCCAATAGTGATGAGGATCATCGGCCCACCATAAAAGGGTTTGGTTTTGAAGACAACCGTCTCATGAATGGTAACTGGTTGAAAGAGTCCAATGCTGATGTTCTTTTGATGTTTTTCCGAGTATTAGCAGTTTGCCATACCGCCATTCCTGAGCTGAATGAGGAGACTGGCAAATTTACATATGAAGCTGAGTCACCTGATGAAGGGGCCTTTCTTGTAGCCGCAAGAGAGTTTGGTTTTGAGTTTTTCAGAAGGACTCAGTCAAGTGTTTTCACACGTGAAAGATTATATGCTTCCGGAGAAGTGGTTGAAAGAGAATACAAACTCTTGAATCTGATGGATTTCACTAGTAAAAGAAAGCGTATGTCAGTGATAGTGCGTGATGAGGAAGGGAACATTTTTCTTCTGTGCAAAGGGGCTGACAGCATCATATTTGATCGTCTGTCAAAGAATGGAAAAATGTATCTGGAGGCTACTACTAAACATTTAAATGAATATGGAGAAGTTGGTTTGCGAACCCTAGCCCTGGCTTATAGAAAGCTTGATGAGCAAGAGTTCTCAGCTTGGAACAGTGAATTTCAGAAAGCCAAAGCAACTGTTGGAGCTGACAGAGAGGCAACACTTGAGCGGATATCAGAGATTATGGAAAAAGAGTTGATTCTTGTTGGGGCTACCGCTGTGGAAGACAAACTGCAGAAAGGGGTGCCCCAATGCATTGATAAACTTGCTCAAGCTGGTCTCAAGATCTGGGTGTTGACAGGGGATAAGATGGAAACTGCAATAAACATTGGATTTGCTTGCAGTTTGCTTCGACAGGGCATGAAGCAGATCTGTATAACTACTCCGAATTCAGAAAATGATGGCAAAGAAGTCATAAGGGACAACATTATGAATCAAATCACCAACGCCTCACAAATGGTAAAGCTAGAGAAAGATCCTCATGCTGCGTTTGCATTAATTATTGATGGGAAAACTCTGACATTTGCTTTAGAGGATGATATGAAGCTCCAATTTTTGGGATTGGCTGTTGATTGTGCATCTGTCATCTGCTGCCGCGTGTCTCCTAAGCAAAAGGCATTGGTGACAAGGTTAGTGAAAGAAGGAACTGGGAAGACCACTCTAGCAATAGGTGATGGTGCAAATGATGTGGGGATGATTCAAGAAGCAGATATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTTGCTATTGCCCAATTTCGATTTTTAGAGCGGCTTCTGGTAGTCCATGGACACTGGTGTTATAAGAGAATAGCACAAATGATATGTTATTTCTTCTACAAGAATATAGCATTTGGCCTCACCATCTTCTACTTTGAGGCCTTTACAGGCTTCTCTGGTCAATCAGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTGACATCATTACCTGTCATTTCACTTGGTGTTTTTGAACAAGACGTTTCATCCGAAGTTTGCTTACAGTTTCCTGCACTGTATCAACAAGGACCCAAAAATCTGTTCTTCGACTGGTATAGAATATTGGGGTGGATGGGAAATGGTCTCTATTCCTCCCTAGTCATCTTCTTCCTTAATATCGCCTTCTTCAACGACCAAGCATTCCGTTCTAATGGCCAGACTGCTGATATGGCTGCAGTTGGGACCACAATGTTCACTTGCATCATCTGGGCCGTAAACTGCCAGATCGCGTTGACAATGAGCCATTTTACATGGATTCAGCACCTGTTTGTATGGGGCAGCATAGCCACTTGGTACTTCTTTCTCTTGTTATATGGCATGCTTTCTCCACAATATTCAAAGACTGCCTACCAAATACTGGTTGAAGCTCTAGGTCCTGCACCTATATATTGGTTAGCAACACTTTTAGTTACAGCTACATGCAATCTTCCTTATCTTGCCCACATCTCCTTCCAAAGAAGTTTCAATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAAGAAGGATATTGAAGATCAACACATGTGGACCAGGGAGAGGTCTAAAGCAAGACACGAAACCCAGATCGGATTCACAGCGAGAGTGGAAGCAAAGATCAGACAATTGAAAGGAAAACTGCAGAAGAAGCAATCTTCCATGGGTATTATCTCATCCTGA 3657 0.4228 MARGRIRARLRRSNLYTFSCLRPSTTEEAPHPLQGPGFSRTVHCNQPLLHERKPLFYCRNDISTTKYNVITFLPKALFEQFRRVANIYFLLAACLSVTSMSPFSPLSMIAPLAFVVGLSMAKEALEDSRRLVQDVKVNRRKVNQHKGNGDFGPRSWQKIMVGDVVKVEKDQFFPADLLLLSTSYEDGICYVETMNLDGETNLKVKRSLEATLTLDNDGAFKDFTGTIRCEDPNSSLYTFVGNLEYERLVYPLDPSQILLRDSKLRNTDYIYGVAIFTGHDSKVMQNSTRSPSKRSTIEKKMDYIIYTLFTVLIFISVVSSIGFVVKTKYQTTKWWYLRPDRIDKQYDPKEIGTAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSDVEVAAAKQMASDLEDDDSDLSNFPMPKTKVSWEDVRRAEEIELESVVTSNSDEDHRPTIKGFGFEDNRLMNGNWLKESNADVLLMFFRVLAVCHTAIPELNEETGKFTYEAESPDEGAFLVAAREFGFEFFRRTQSSVFTRERLYASGEVVEREYKLLNLMDFTSKRKRMSVIVRDEEGNIFLLCKGADSIIFDRLSKNGKMYLEATTKHLNEYGEVGLRTLALAYRKLDEQEFSAWNSEFQKAKATVGADREATLERISEIMEKELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITTPNSENDGKEVIRDNIMNQITNASQMVKLEKDPHAAFALIIDGKTLTFALEDDMKLQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLVIFFLNIAFFNDQAFRSNGQTADMAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLFVWGSIATWYFFLLLYGMLSPQYSKTAYQILVEALGPAPIYWLATLLVTATCNLPYLAHISFQRSFNPMDHHIIQEIKYYKKDIEDQHMWTRERSKARHETQIGFTARVEAKIRQLKGKLQKKQSSMGIISS 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1064 1218 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1216 - -
Lal20g1064 1218 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 848 957 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal20g1064 1218 Gene3D - 112 288 - -
Lal20g1064 1218 Gene3D - 591 699 IPR023299 GO:0000166
Lal20g1064 1218 SFLD p-type atpase 405 927 IPR044492 -
Lal20g1064 1218 Gene3D - 718 916 IPR023214 -
Lal20g1064 1218 SUPERFAMILY Calcium ATPase, transduction domain A 148 286 IPR008250 -
Lal20g1064 1218 Gene3D - 432 456 IPR023299 GO:0000166
Lal20g1064 1218 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Lal20g1064 1218 Pfam Phospholipid-translocating P-type ATPase C-terminal 904 1154 IPR032630 -
Lal20g1064 1218 SFLD C1.7: P-type atpase like 405 927 - -
Lal20g1064 1218 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Lal20g1064 1218 PRINTS P-type cation-transporting ATPase superfamily signature 876 895 - -
Lal20g1064 1218 Gene3D - 419 431 IPR023214 -
Lal20g1064 1218 SUPERFAMILY HAD-like 410 920 IPR036412 -
Lal20g1064 1218 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Lal20g1064 1218 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 521 683 IPR023299 GO:0000166
Lal20g1064 1218 Pfam Cation transport ATPase (P-type) 544 649 - -
Lal20g1064 1218 CDD P-type_ATPase_APLT_Dnf-like 59 1035 - -
Lal20g1064 1218 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1144 IPR023298 -
Lal20g1064 1218 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1162 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lal20g1064 1218 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1064 Lal-Chr20 14526667 14534356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1064 1 1218 Primary Pumps ATPases AT1G17500 75.512 0.0 1943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1064 K01530 - gmx:100819559 2145.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1064 20 14526667 14534356 Lal20g1064 20 14526667 14534356 ECH