Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1046 ATGTTGACTTGCATAGCATGTTCCAAGCAAGTAAATAGTAATGGATCTCTTCACCAACAAGAAGAAGATGAAGAAGAAATTCATACACCAAATACCAAACATGCCATCAAGAATATCACTTCACAAATCAAGGACATGGCAGTGAAGGCTTCAGGGGCCTATAAAAATTGCAAGCCTTGTTCAGGATCTTCCAACGGTAACCGGAATGGAAACTATGCTGACTCCGATTTGGGTTCGGATTCAGCGAGGTTTAACTTGACATACCGTAGAACAGGAAGCTTCAATTCGACCCCGAGGCTGTGGGGGAAGAAGGTGGAAGCTAGACTGAAAGGGATTTCCAGTGGGGAAGGAACACCGACATCGGTGAGTGGAAGAACTGAGTCAGTGATGTTCATGGAGGAGGATGAACCAAAGGAATGGATTGCACAAGTGGAACCTGGTGTGCTCATTACCTTTGTTTCTTTACCTCATTGTGGCAATGATCTAAAGAGGATCCAGTTCAGTCGTGAAATGTTCAATAAACGGCAAGCTCAGAGGTGGTGGGCTGAGAATTATGACAAGGTCATGGAATTGTACAATGTTCAAAGATTCAATCAACAAGCAGTTCCTCTTCCAACCCCACCTATATCCGAAGATGAGAGTTCGAAGATTGAATCTGTCAGGGATAGCCCGGTGACGCCTCCTCTCACCATAGAGCGTGTGCCCCGTCATCTTCACCACCAACCAAAGGGAATGGGCTACTCCTCATCAGATTCACCGGATCACCACCGAATGAAACCTCAACCTTGCTATGAAACAATCGGCCAATCCTCAACACCTAATCTTTCTAACATAAATAGGCCAAAGACTGAAAGACCATCCATTGATGGTTCTGTAAGGACTAGTTCATCAAGAGAGGATGACAACTCAGGTGAGTTTTCTATCAGCAATGCGAGTGATATGGAAACCGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACTATACGATCACTGCCAGGCGGAGCCAGAGAACTTAGGCGTGTCCGATTCAGGCAAGATTTCAATTTTCACGATTCCTCGCGTATTTCTTTTATCACAGAAAAGGCTAACAGGCCTGATAAACTTCATTTTGCCGAGAAAAGTTTGGAGAAATGCACGCCAGACTATGGTGGGAAGAGAATCGCGCTAGAATACAAGAGCAATACTTATGAGATTGTTGTAACCATGGATGAGCATTTTCACATAACTACTTCAACAGGCTAA 1248 0.4439 MLTCIACSKQVNSNGSLHQQEEDEEEIHTPNTKHAIKNITSQIKDMAVKASGAYKNCKPCSGSSNGNRNGNYADSDLGSDSARFNLTYRRTGSFNSTPRLWGKKVEARLKGISSGEGTPTSVSGRTESVMFMEEDEPKEWIAQVEPGVLITFVSLPHCGNDLKRIQFSREMFNKRQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPISEDESSKIESVRDSPVTPPLTIERVPRHLHHQPKGMGYSSSDSPDHHRMKPQPCYETIGQSSTPNLSNINRPKTERPSIDGSVRTSSSREDDNSGEFSISNASDMETEWVEQDEPGVYITIRSLPGGARELRRVRFRQDFNFHDSSRISFITEKANRPDKLHFAEKSLEKCTPDYGGKRIALEYKSNTYEIVVTMDEHFHITTSTG 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1046 415 MobiDBLite consensus disorder prediction 264 293 - -
Lal20g1046 415 Pfam Transcription factor BRX N-terminal domain 24 60 IPR027988 -
Lal20g1046 415 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 348 IPR044532 -
Lal20g1046 415 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 348 - -
Lal20g1046 415 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
Lal20g1046 415 MobiDBLite consensus disorder prediction 301 315 - -
Lal20g1046 415 Pfam Transcription factor regulating root and shoot growth via Pin3 315 347 IPR013591 -
Lal20g1046 415 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Lal20g1046 415 ProSiteProfiles BRX domain profile. 316 371 IPR013591 -
Lal20g1046 415 MobiDBLite consensus disorder prediction 202 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1046 Lal-Chr20 14284477 14289084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1046 1 348 Major Intrinsic Protein MIP AT1G31880 44.293 3.54e-77 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1046 - - gmx:100805480 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1046 20 14284477 14289084 Lal20g1046 20 14284477 14289084 ECH