Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1017 ATGAGCAAAAATACTACCACTTCGGATCCCAAGTTTTCTGCGTTTCAAAAAGAAAACCCGGGACGTATCGCCCAAATAATTGGTCCGGTACTGGATGTATCTTTTCCCCCGGGGAAGATGCCGAATATTTACAACGCTCTGATAGTTAAGGGACAAGATACTGTTGGTCAACAAATTAACATTACTTGTGAAGTACAGCAATTATTAGGAAATAATCGAATCAGAGCTGTAGCTATGAGTGCTACAGAGGGTCTAATGAGAGGAATGGAAGTGATTGACACAGGGGCTCCTCTAAGTGTTCCAGTCGGCGGAGCAACTCTAGGACGCATTTTCAACGTGCTTGGAGAGCCTATTGACAATTTAGGTCCTGTAGATACTCGCACAACATCTCCTATTCATCGATCCGCACCTGCCTTTATACAATTAGATACAAAATTATCCATTTTTGAAACAGGGATTAAAGTAGTCGATCTTTTAGCTCCCTATCGCCGTGGAGGAAAAATAGGACTTTTCGGTGGAGCTGGAGTGGGTAAAACAGTACTCATTATGGAATTGATCAATAACATTGCCAAAGCTCATGGGGGTGTATCTGTTTTTGGCGGAGTAGGTGAACGTACTCGTGAGGGAAATGATCTTTACATGGAAATGAAAGAATCTGGAGTAATTAATGAACAAAATATTGCAGAATCAAAAGTGGCTCTAGTCTACGGTCAAATGAATGAACCGCCTGGAGCTCGTATGAGAGTTGGGTTAACTGCCCTAACTATGGCGGAATATTTCCGGGATGTCAATGAACAAGACGTACTTCTATTTATCGACAATATCTTCCGTTTC 834 0.4197 MSKNTTTSDPKFSAFQKENPGRIAQIIGPVLDVSFPPGKMPNIYNALIVKGQDTVGQQINITCEVQQLLGNNRIRAVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1017 278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 278 IPR027417 -
Lal20g1017 278 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 152 278 IPR000194 GO:0005524
Lal20g1017 278 PANTHER ATP SYNTHASE 1 278 - -
Lal20g1017 278 Pfam ATP synthase alpha/beta family, beta-barrel domain 23 95 IPR004100 GO:0046034|GO:1902600
Lal20g1017 278 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 1 278 - -
Lal20g1017 278 Gene3D - 98 278 IPR027417 -
Lal20g1017 278 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 20 97 IPR036121 GO:0046034|GO:1902600
Lal20g1017 278 CDD ATP-synt_F1_beta_N 19 98 - -
Lal20g1017 278 Gene3D - 18 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1017 Lal-Chr20 13556244 13557077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1017 94 278 Primary Pumps ATPases(2) AT1G20260 25.837 6.36e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1017 K02112 - gmx:3989272 518.464